RNA id: TU91529



Basic Information


Item Value
RNA id TU91529
length 346
lncRNA type sense_over
GC content 0.40
exon number 2
gene id G73257
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 33645924 ~ 33725262 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ttttcccttttcactccattctttgtaaaccctagaaatggttgtgcgtgaaaatcccagtaactgagcagattgtgaaatactcagaccggcccgtctggcaccaacaaccatgccacgctcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatatatatatacactcacctaaaggattattaggaacacctg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91515 lncRNA upstream 441 33455611 ~ 33645483 (+) False G73247
TU91514 lncRNA upstream 189510 33455611 ~ 33456414 (+) True G73247
TU91485 lncRNA upstream 575710 33070003 ~ 33070214 (+) True G73220
TU91472 lncRNA upstream 839615 32804668 ~ 32806309 (+) True G73212
TU91410 lncRNA upstream 964119 32672511 ~ 32681805 (+) True G73158
TU91534 lncRNA downstream 53961 33779223 ~ 33779473 (+) True G73261
TU91542 lncRNA downstream 127414 33852676 ~ 33853024 (+) True G73269
TU91552 lncRNA downstream 282709 34007971 ~ 34027770 (+) True G73279
TU91560 lncRNA downstream 390084 34115346 ~ 34115704 (+) True G73285
TU91574 lncRNA downstream 568075 34293337 ~ 34293543 (+) True G73295
AMCG00014822 mRNA upstream 876945 32758965 ~ 32768979 (+) True AMCG00014822
AMCG00014821 mRNA upstream 889787 32734868 ~ 32756137 (+) True AMCG00014821
AMCG00014817 mRNA upstream 982770 32653743 ~ 32663154 (+) True AMCG00014817
AMCG00014815 mRNA upstream 1248416 32396687 ~ 32397508 (+) True AMCG00014815
AMCG00014812 mRNA upstream 1390633 32242954 ~ 32255291 (+) True AMCG00014812
AMCG00014831 mRNA downstream 965823 34691085 ~ 34931860 (+) True AMCG00014831
AMCG00014833 mRNA downstream 1302595 35027857 ~ 35320982 (+) True AMCG00014833
AMCG00014835 mRNA downstream 1645722 35370984 ~ 35382903 (+) True AMCG00014835
AMCG00014836 mRNA downstream 1669048 35394310 ~ 35412072 (+) False AMCG00014836
AMCG00014834 mRNA downstream 1738739 35464001 ~ 35474369 (+) True AMCG00014834
TU91511 other upstream 279824 33364755 ~ 33366100 (+) True G73244
TU91344 other upstream 1084435 32542510 ~ 32561489 (+) True G73103
TU91144 other upstream 1890994 31717118 ~ 31754930 (+) True G72925
TU90967 other upstream 2649561 30990063 ~ 30996363 (+) True G72787
TU90966 other upstream 2665672 30979570 ~ 30980252 (+) True G72786
TU91569 other downstream 513672 34238934 ~ 34239400 (+) True G73292
TU91608 other downstream 1054860 34780122 ~ 34780590 (+) True G73329
TU91622 other downstream 1216749 34942011 ~ 34960447 (+) True G73343
TU91690 other downstream 1665372 35390634 ~ 35394649 (+) False AMCG00014836
TU92227 other downstream 3792846 37518108 ~ 37518406 (+) True G73850

Expression Profile