RNA id: TU91532



Basic Information


Item Value
RNA id TU91532
length 340
lncRNA type inter_gene
GC content 0.41
exon number 2
gene id G73259
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 33645933 ~ 33702805 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


atgataggatctttctcggcacccaaacgtaaatgagacatatatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaatcacatggcagttgcttcaatgcatttaggggtgtggtcctggtcaagacaatctcctgaactccaaactgaatgtctgaatgggaaagaaaggtgatttaagcaattttgagcgtggcatggttgttggtgccagacgggccggtctgagtatttcacaatctgctcagttactgggattttcacgcacaaccatttctagggtttacaaagaatggagtgaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91512 lncRNA downstream 279850 33365708 ~ 33366083 (-) True G73245
TU91509 lncRNA downstream 326308 33319425 ~ 33319625 (-) True G73242
TU91497 lncRNA downstream 398312 33247337 ~ 33247621 (-) True G73232
TU91487 lncRNA downstream 574409 33070249 ~ 33071524 (-) True AMCG00014825
TU91443 lncRNA downstream 855535 32789023 ~ 32790398 (-) True G73187
TU91533 lncRNA upstream 76188 33778993 ~ 33779193 (-) True G73260
TU91537 lncRNA upstream 86051 33788856 ~ 33789222 (-) True G73264
TU91541 lncRNA upstream 108225 33811030 ~ 33811318 (-) True G73268
TU91543 lncRNA upstream 149890 33852695 ~ 33853024 (-) True G73270
TU91563 lncRNA upstream 420473 34123278 ~ 34123649 (-) True G73288
AMCG00014826 mRNA downstream 211551 33127678 ~ 33434382 (-) True AMCG00014826
AMCG00014825 mRNA downstream 526605 33070806 ~ 33119328 (-) False AMCG00014825
AMCG00014824 mRNA downstream 839640 32795005 ~ 32806293 (-) False AMCG00014824
AMCG00014823 mRNA downstream 852508 32791881 ~ 32793425 (-) True AMCG00014823
AMCG00014818 mRNA downstream 992513 32650176 ~ 32653420 (-) True AMCG00014818
AMCG00014828 mRNA upstream 861681 34564486 ~ 34565202 (-) True AMCG00014828
AMCG00014829 mRNA upstream 1207788 34910593 ~ 34931646 (-) True AMCG00014829
AMCG00014830 mRNA upstream 1240170 34942975 ~ 34960249 (-) True AMCG00014830
AMCG00014832 mRNA upstream 1470064 35172869 ~ 35180639 (-) True AMCG00014832
AMCG00014839 mRNA upstream 1878910 35581715 ~ 35592456 (-) False AMCG00014839
TU91480 other downstream 839638 32801858 ~ 32806295 (-) True AMCG00014824
TU91374 other downstream 1026784 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 1031127 32597462 ~ 32614806 (-) True G73127
TU91283 other downstream 1382506 32263167 ~ 32263427 (-) True G73047
TU90581 other downstream 4247628 29389290 ~ 29398305 (-) True G72477
TU91607 other upstream 1066778 34769583 ~ 34769979 (-) True G73328
TU91914 other upstream 1877821 35580626 ~ 35608677 (-) True AMCG00014839
TU91940 other upstream 2398553 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 2550969 36253774 ~ 36254187 (-) True G73612
TU92007 other upstream 2670346 36373151 ~ 36393493 (-) True AMCG00014845

Expression Profile