RNA id: TU91614



Basic Information


Item Value
RNA id TU91614
length 311
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G73335
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34837633 ~ 34837943 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


AGGCCCCTTAGTGCCAATTGGGCAtcgtttaaatgccacggcctacctgagcCTACCtacctggatgtgcatcccacaaatctccatcaactgcaagatgctatcctatcaatatgggccaacatttctaaagaatgctttcagcatcttgttgaatcaatgccacgtagaattaaggcagttctgaaggcgaaagtgggtcaaacacagtattagtatggtgttcctaataatcctttaggtgagtgtatatatatatatatatatatatatatgtgtgtgtgtgtatgtatatcaatatgcaaaataat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91609 lncRNA downstream 57043 34780122 ~ 34780590 (-) True G73330
TU91598 lncRNA downstream 234477 34569550 ~ 34603156 (-) True G73319
TU91588 lncRNA downstream 374308 34462489 ~ 34463325 (-) True G73309
TU91577 lncRNA downstream 474619 34362758 ~ 34363014 (-) True G73298
TU91575 lncRNA downstream 544093 34293273 ~ 34293540 (-) True G73296
TU91615 lncRNA upstream 27582 34865525 ~ 34865745 (-) True G73336
TU91651 lncRNA upstream 385585 35223528 ~ 35223860 (-) True G73365
TU91652 lncRNA upstream 395777 35233720 ~ 35234115 (-) True G73366
TU91659 lncRNA upstream 413951 35251894 ~ 35252734 (-) True G73373
TU91665 lncRNA upstream 419523 35257466 ~ 35258943 (-) True G73378
AMCG00014828 mRNA downstream 272431 34564486 ~ 34565202 (-) True AMCG00014828
AMCG00014826 mRNA downstream 1403251 33127678 ~ 33434382 (-) True AMCG00014826
AMCG00014825 mRNA downstream 1718305 33070806 ~ 33119328 (-) False AMCG00014825
AMCG00014824 mRNA downstream 2031340 32795005 ~ 32806293 (-) False AMCG00014824
AMCG00014823 mRNA downstream 2044208 32791881 ~ 32793425 (-) True AMCG00014823
AMCG00014829 mRNA upstream 72650 34910593 ~ 34931646 (-) True AMCG00014829
AMCG00014830 mRNA upstream 105032 34942975 ~ 34960249 (-) True AMCG00014830
AMCG00014832 mRNA upstream 334926 35172869 ~ 35180639 (-) True AMCG00014832
AMCG00014839 mRNA upstream 743772 35581715 ~ 35592456 (-) False AMCG00014839
AMCG00014838 mRNA upstream 797044 35634987 ~ 35688097 (-) True AMCG00014838
TU91607 other downstream 67654 34769583 ~ 34769979 (-) True G73328
TU91480 other downstream 2031338 32801858 ~ 32806295 (-) True AMCG00014824
TU91374 other downstream 2218484 32597462 ~ 32619149 (-) False G73127
TU91373 other downstream 2222827 32597462 ~ 32614806 (-) True G73127
TU91283 other downstream 2574206 32263167 ~ 32263427 (-) True G73047
TU91914 other upstream 742683 35580626 ~ 35608677 (-) True AMCG00014839
TU91940 other upstream 1263415 36101358 ~ 36182351 (-) True G73604
TU91951 other upstream 1415831 36253774 ~ 36254187 (-) True G73612
TU92007 other upstream 1535208 36373151 ~ 36393493 (-) True AMCG00014845
TU92209 other upstream 2487077 37325020 ~ 37325307 (-) True G73833

Expression Profile