RNA id: TU91951



Basic Information


Item Value
RNA id TU91951
length 414
RNA type TUCP
GC content 0.46
exon number 1
gene id G73612
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36253774 ~ 36254187 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGCGTTTCCGCGCTGAGGTTATCAACACCTCAGGTCTCGACCCTTTGCAAAGTGTGACCATAGCGTCTTTCTGCATGAAAATGTATCGGgccaatttcttgcagaaaaacactATAGCGGTCACCACTTCTGACAACTATCGTGCTAGACAAAAGAACTTTTCGACTGTCTCCATACAGTGGCTGGAATACCTGAGTGTCAGGGATAACATCTTCATCAGACATGCTTTAAATCAAGGGGATGTCAAAATGGGGCCTTACTACTTAGACGGTTTTAGCGACGTGTCCGGGATGCGTACCGCTTATGAGTTTGCTGGCTGTATTTACCATGGCTGTCCGCAGTGCTTCGACCCAAACACCTTTAACCCAGTAACACAAAAACTCTGCGGTGATATGTACTATGATTTCCAGGAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU91948 lncRNA downstream 59524 36194048 ~ 36194250 (-) True G73609
TU91945 lncRNA downstream 196316 36055996 ~ 36057458 (-) True G73606
TU91890 lncRNA downstream 410783 35434969 ~ 35842991 (-) True G73568
TU91882 lncRNA downstream 789109 35391184 ~ 35464665 (-) True G73562
TU91864 lncRNA downstream 830639 35340673 ~ 35423135 (-) True G73548
TU92025 lncRNA upstream 220056 36474243 ~ 36475948 (-) True G73667
TU92063 lncRNA upstream 391872 36646059 ~ 36652043 (-) True G73704
TU92083 lncRNA upstream 435170 36689357 ~ 36730561 (-) True G73722
TU92141 lncRNA upstream 761763 37015950 ~ 37016173 (-) True G73776
TU92178 lncRNA upstream 918743 37172930 ~ 37173171 (-) True G73803
AMCG00014843 mRNA downstream 180466 36062619 ~ 36073308 (-) True AMCG00014843
AMCG00014840 mRNA downstream 267206 35978206 ~ 35986568 (-) True AMCG00014840
AMCG00014842 mRNA downstream 439336 35792348 ~ 35814438 (-) True AMCG00014842
AMCG00014841 mRNA downstream 486384 35742534 ~ 35767390 (-) True AMCG00014841
AMCG00014838 mRNA downstream 565677 35634987 ~ 35688097 (-) True AMCG00014838
AMCG00014845 mRNA upstream 119350 36373537 ~ 36390780 (-) False AMCG00014845
AMCG00014847 mRNA upstream 210267 36464454 ~ 36526810 (-) True AMCG00014847
AMCG00014846 mRNA upstream 285631 36539818 ~ 36570308 (-) True AMCG00014846
AMCG00014849 mRNA upstream 549045 36803232 ~ 36804839 (-) True AMCG00014849
AMCG00014851 mRNA upstream 676820 36931007 ~ 36944739 (-) True AMCG00014851
TU91940 other downstream 71423 36101358 ~ 36182351 (-) True G73604
TU91914 other downstream 645097 35580626 ~ 35608677 (-) True AMCG00014839
TU91607 other downstream 1483795 34769583 ~ 34769979 (-) True G73328
TU91480 other downstream 3447479 32801858 ~ 32806295 (-) True AMCG00014824
TU91374 other downstream 3634625 32597462 ~ 32619149 (-) False G73127
TU92007 other upstream 118964 36373151 ~ 36393493 (-) True AMCG00014845
TU92209 other upstream 1070833 37325020 ~ 37325307 (-) True G73833
TU92296 other upstream 1525146 37779333 ~ 37783575 (-) True G73916
TU92499 other upstream 2089135 38343322 ~ 38350291 (-) False G74087
TU92533 other upstream 2157973 38412160 ~ 38413231 (-) True G74107

Expression Profile