Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU147567 |
| length | 1103 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G117768 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030135.1 |
| NCBI id | CM030135.1 |
| chromosome length | 28454832 |
| location | 16748869 ~ 16749971 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU147415 | lncRNA | upstream | 627424 | 16083353 ~ 16121445 (+) | True | G117660 |
| TU147317 | lncRNA | upstream | 1050004 | 15695426 ~ 15698865 (+) | True | G117573 |
| TU147318 | lncRNA | upstream | 1053616 | 15693213 ~ 15695253 (+) | True | G117574 |
| TU147297 | lncRNA | upstream | 1121150 | 15627339 ~ 15627719 (+) | True | G117557 |
| TU147253 | lncRNA | upstream | 1219528 | 15525714 ~ 15529341 (+) | False | G117521 |
| TU147592 | lncRNA | downstream | 258927 | 17008898 ~ 17009246 (+) | True | G117783 |
| TU147612 | lncRNA | downstream | 403811 | 17153782 ~ 17155824 (+) | True | G117801 |
| TU147618 | lncRNA | downstream | 410791 | 17160762 ~ 17161040 (+) | True | G117804 |
| TU147619 | lncRNA | downstream | 411543 | 17161514 ~ 17161723 (+) | True | G117805 |
| TU147622 | lncRNA | downstream | 474041 | 17224012 ~ 17224609 (+) | True | G117808 |
| AMCG00018641 | mRNA | upstream | 314566 | 16419039 ~ 16434303 (+) | True | AMCG00018641 |
| AMCG00018636 | mRNA | upstream | 370168 | 16373896 ~ 16378701 (+) | True | AMCG00018636 |
| AMCG00018638 | mRNA | upstream | 450158 | 16296038 ~ 16298711 (+) | True | AMCG00018638 |
| AMCG00018637 | mRNA | upstream | 462206 | 16280833 ~ 16286663 (+) | True | AMCG00018637 |
| AMCG00018635 | mRNA | upstream | 470068 | 16256197 ~ 16278801 (+) | True | AMCG00018635 |
| AMCG00018648 | mRNA | downstream | 321383 | 17071354 ~ 17090022 (+) | True | AMCG00018648 |
| AMCG00018647 | mRNA | downstream | 391418 | 17141389 ~ 17149356 (+) | True | AMCG00018647 |
| AMCG00018654 | mRNA | downstream | 503184 | 17253155 ~ 17256857 (+) | True | AMCG00018654 |
| AMCG00018655 | mRNA | downstream | 540731 | 17290702 ~ 17296987 (+) | True | AMCG00018655 |
| AMCG00018659 | mRNA | downstream | 796989 | 17546960 ~ 17574431 (+) | True | AMCG00018659 |
| TU147178 | other | upstream | 1792289 | 14954564 ~ 14956580 (+) | False | AMCG00018602 |
| TU147084 | other | upstream | 1960736 | 14786623 ~ 14788133 (+) | True | G117383 |
| TU147075 | other | upstream | 1972375 | 14775789 ~ 14776494 (+) | False | G117379 |
| TU146792 | other | upstream | 2401128 | 14345090 ~ 14347741 (+) | True | G117178 |
| TU146730 | other | upstream | 2506832 | 14239498 ~ 14242037 (+) | False | AMCG00018551 |
| TU147595 | other | downstream | 318241 | 17068212 ~ 17069670 (+) | True | G117786 |
| TU147848 | other | downstream | 1231239 | 17981210 ~ 17982114 (+) | False | AMCG00018681 |
| TU147849 | other | downstream | 1231239 | 17981210 ~ 17982303 (+) | False | AMCG00018681 |
| TU147936 | other | downstream | 1969235 | 18719206 ~ 18721343 (+) | True | AMCG00018702 |
| TU148213 | other | downstream | 2698655 | 19448626 ~ 19450628 (+) | False | AMCG00018740 |
