RNA id: AMCG00019924


Basic Information

Item Value
RNA id AMCG00019924
length 1704
RNA type mRNA
GC content 0.60
exon number 10
gene id AMCG00019924
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3024389 ~ 3031475 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGGAAGGGAAGAACATAAACAAAGGGCTGTTCAGCTCCATGGACGTCTTCAAAGGGATCCCCTTTGCCGCCCCCCCCGGCAGATTCCAATACCCCAAGCCTCACCCAGGATGGTCAGGTGTGCTGAAGGCCACAGAGTTTCAAAAGCGGTGTCTCCAAGTCACACTCACCCAGACCAGCACCCGCGGCAGCGAGGACTGTCTCTATCTCAACATCTGGGTCCCGCAGGGCTCTAAGGCCGTGCTGTGCTCTGCCTCCCCAGTGTCCACCGGCCTGCCCGTCATGGTGTACCTGTTCGGAGGGGGCTTCCTGGTAgggggggcccagggagcaaacTTCATGGACAACTACCTCTACAGCGGCGAGGAGATCGCGGACCGCGGCAAAGTCATCGTGGTGTCGGTCAACTACCGCGTGGGCTCCCTGGGCTTCCTCAGCACCGGCGATGCCAATGCGCCCGGAAACTATGGGCTGAGAGACCAACATGCCGGCATCGCCTGGGTCCACAGGAACATCAGGGCATTCGGGGGAGACCCGGACAACATCACCATCTTTGGGGAGTCGGCAGGCAGCGCCAGCGTCAGCTTACAGATCCTGTCGCCGTACAACAAAGGCATAATCCGCAGAGCTATCTCCCAGAGCGGGGTGGCTCTGAGCCCCTGGGCCATCAACAAGAACCCCCTGCCTTTGGCCCAGAAGATCGCACAGAAGGTGGGCTGCCCCATTAACAACACCACACAGCTCATGGCCTGTCTGAGGATCACAGACCCTGTGGCCGTGACCATGGCTGGGGACCTTTTGCTGTTTGGATCAACGGCTGACCGAGGAGGGCAGCACCTTGTGGAGGCTTGGTACTCTCACCCTGGTCACAGTGGATGCTCACTGCGCTCGGCTGTCCCGTCCCGCCCCTCCTCAGAACCCATCGTGTGGAACCTGGGGCTCTCTCCGGTTATCGACGGTGACTTCATCCCAGACGACCCCGGAAACCTGTTCCACAATGCGGAGGACATTGACTACATTGCTGGAGTCAACAACATGGACGGACACCTGTTCGCCGGCATCGACGTCCCCTCCCTCAACAGCAACCTGCTGGAAACCTCGCCGGAGGATGTGAAGAACTTGCTGCGCGGCCTGACCAAGGAGAAGGGGGAGCAAGCAGCCAACGCCGCCTACGGCCTGTACACCCGCAACTGGGGGGCCAGCCCCTCGAAGGAAACCGTCAAGACCACTGTGGTGGACGCAGAGACCGACTTCCTCTTCCTCGTCCCCACCCAGGCTACTCTGTACCTGCACGCTGAAAAAGCCAAGACAGGGAAGACGTACTCCTACGTGTTCAACATGCCCTCTCGGATCCCCGTCTTCCCTAGCTGGATGGGCGCAGACCACGCTGAGGACCTGCAGTATGTGTTCGGGAAGCCCTTCACCACTCCGCTGGCCTACTTCCCCCGCCACCGCGATGTCTCTCGATATATGATCGCCTACTGGACCAACTTCGCCCACACGGGTAACCCCAATAAAGGCGAGTCCAGTGTCCCTGCCACCTGGCCCCAGTTCACCAACCTGCAACCCCAGTACCTGGAGATCAACAACAAGATCAATCAGAACTCCATCAAGAACAGTCTGAGGATCCCATTCGTCCAATACTGGACTATCACCTTCCACAGCTTCCCCACAGTGGCCAACAGCACTGCCGAGCAGTGA

Function

GO:

id name namespace
GO:0005829 cytosol cellular_component
GO:0005615 extracellular space cellular_component
GO:0047372 acylglycerol lipase activity molecular_function

KEGG:

id description
K12298 CEL; bile salt-stimulated lipase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU74584 lncRNA upstream 54811 2962508 ~ 2969578 (+) False AMCG00019920
TU74574 lncRNA upstream 138973 2883714 ~ 2885416 (+) True G59646
TU74563 lncRNA upstream 197752 2825591 ~ 2826637 (+) True G59638
TU74548 lncRNA upstream 236150 2787910 ~ 2788239 (+) True G59625
TU74500 lncRNA upstream 307474 2715528 ~ 2716915 (+) True G59578
TU74654 lncRNA downstream 403 3031878 ~ 3034341 (+) True G59700
TU74670 lncRNA downstream 76325 3107800 ~ 3109882 (+) True G59714
TU74671 lncRNA downstream 85043 3116518 ~ 3116819 (+) True G59715
TU74672 lncRNA downstream 85739 3117214 ~ 3117452 (+) True G59716
TU74673 lncRNA downstream 86047 3117522 ~ 3117909 (+) True G59717
AMCG00019925 mRNA upstream 3612 3016234 ~ 3020777 (+) True AMCG00019925
AMCG00019926 mRNA upstream 19484 2995864 ~ 3004905 (+) True AMCG00019926
AMCG00019920 mRNA upstream 54794 2962511 ~ 2969595 (+) True AMCG00019920
AMCG00019921 mRNA upstream 105508 2910244 ~ 2918881 (+) True AMCG00019921
AMCG00019915 mRNA upstream 147571 2869705 ~ 2876818 (+) True AMCG00019915
AMCG00019930 mRNA downstream 98454 3129929 ~ 3141283 (+) True AMCG00019930
AMCG00019929 mRNA downstream 110972 3142447 ~ 3147034 (+) True AMCG00019929
AMCG00019932 mRNA downstream 117619 3149094 ~ 3157541 (+) True AMCG00019932
AMCG00019931 mRNA downstream 127122 3158597 ~ 3161191 (+) True AMCG00019931
AMCG00019935 mRNA downstream 162312 3193787 ~ 3196215 (+) True AMCG00019935
TU74243 other upstream 1946326 1075504 ~ 1078063 (+) False AMCG00019884
TU74166 other upstream 2578859 441598 ~ 445530 (+) True G59305
TU74774 other downstream 209964 3241439 ~ 3250062 (+) False AMCG00019934
TU75012 other downstream 1792338 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 2324297 5355772 ~ 5361863 (+) True G60137
TU75235 other downstream 2326989 5358464 ~ 5359365 (+) True G60132
TU75390 other downstream 3151237 6182712 ~ 6186084 (+) False AMCG00020000

Expression Profile