Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020259 |
| length | 1377 |
| RNA type | mRNA |
| GC content | 0.64 |
| exon number | 7 |
| gene id | AMCG00020259 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 13899044 ~ 13911515 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0051537 | 2 iron, 2 sulfur cluster binding | molecular_function |
| id | description |
|---|---|
| K14938 | NVD, DAF36; cholesterol 7-desaturase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU77495 | lncRNA | upstream | 8616 | 13888151 ~ 13890428 (+) | True | G61895 |
| TU77507 | lncRNA | upstream | 13928 | 13882825 ~ 13885116 (+) | True | AMCG00020241 |
| TU77473 | lncRNA | upstream | 106100 | 13789762 ~ 13792944 (+) | True | AMCG00020245 |
| TU77450 | lncRNA | upstream | 147681 | 13751087 ~ 13751363 (+) | True | G61871 |
| TU77411 | lncRNA | upstream | 189548 | 13708835 ~ 13709496 (+) | True | G61841 |
| TU77649 | lncRNA | downstream | 223783 | 14135298 ~ 14136287 (+) | True | G62012 |
| TU77650 | lncRNA | downstream | 224905 | 14136420 ~ 14136936 (+) | True | G62013 |
| TU77651 | lncRNA | downstream | 225911 | 14137426 ~ 14137829 (+) | True | G62014 |
| TU77670 | lncRNA | downstream | 284269 | 14195784 ~ 14218381 (+) | False | AMCG00020273 |
| TU77683 | lncRNA | downstream | 330350 | 14241865 ~ 14288834 (+) | True | G62039 |
| AMCG00020241 | mRNA | upstream | 14439 | 13884088 ~ 13884605 (+) | False | AMCG00020241 |
| AMCG00020246 | mRNA | upstream | 21818 | 13875641 ~ 13877226 (+) | True | AMCG00020246 |
| AMCG00020244 | mRNA | upstream | 24745 | 13873781 ~ 13874299 (+) | True | AMCG00020244 |
| AMCG00020255 | mRNA | upstream | 26399 | 13864016 ~ 13872645 (+) | False | AMCG00020255 |
| AMCG00020243 | mRNA | upstream | 52059 | 13839553 ~ 13846985 (+) | True | AMCG00020243 |
| AMCG00020260 | mRNA | downstream | 8076 | 13919591 ~ 13944753 (+) | True | AMCG00020260 |
| AMCG00020267 | mRNA | downstream | 38127 | 13949642 ~ 13949983 (+) | False | AMCG00020267 |
| AMCG00020265 | mRNA | downstream | 42972 | 13954487 ~ 13956067 (+) | True | AMCG00020265 |
| AMCG00020262 | mRNA | downstream | 61899 | 13973414 ~ 13975559 (+) | True | AMCG00020262 |
| AMCG00020264 | mRNA | downstream | 76565 | 13988080 ~ 13995139 (+) | True | AMCG00020264 |
| TU77503 | other | upstream | 32481 | 13863477 ~ 13866563 (+) | True | AMCG00020255 |
| TU77491 | other | upstream | 64212 | 13833170 ~ 13834832 (+) | True | G61894 |
| TU77200 | other | upstream | 548332 | 13349677 ~ 13350712 (+) | True | G61675 |
| TU76948 | other | upstream | 1279227 | 12615792 ~ 12619817 (+) | True | G61491 |
| TU76877 | other | upstream | 1361292 | 12535538 ~ 12537752 (+) | False | AMCG00020177 |
| TU77582 | other | downstream | 36911 | 13948426 ~ 13951047 (+) | True | AMCG00020267 |
| TU77751 | other | downstream | 556285 | 14467800 ~ 14469300 (+) | True | AMCG00020281 |
| TU78405 | other | downstream | 2902859 | 16814374 ~ 16815857 (+) | True | G62632 |
| TU78611 | other | downstream | 3547645 | 17459160 ~ 17471869 (+) | True | AMCG00020371 |
| TU78735 | other | downstream | 4016813 | 17928328 ~ 17928904 (+) | True | G62895 |
