RNA id: AMCG00020277



Basic Information


Item Value
RNA id AMCG00020277
length 759
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00020277
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 14294733 ~ 14302999 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGACGGGGGCTCACTGTTCTCCAGCAACGATACCTACATCTGGGGCGACAGTGCGGGACACCTGAACCACACCGGCGACAAGGACGGGGGCCCGGAGGTGGTGATAGTGCCCATCGTGTTCGGGGTCATTTTCCTCCTGGGCATCATCGGGAACACTCTGGTGATGATCGTGATCGGGAGGATCAAGTCCCGGCGCTCCAGGAGCATCACCAACACGTTCATCCTGAACCTCAGCATCGCGGACCTGTCCTTCCTGCTGTTCTGCGTGCCGTTCCAAGCCACCATCTACTCGCTGCCCGAGTGGATCTTCGGCGCCTTCCTGTGCAAATTCGTGCACTACTTCGTGATGGTCAGCATGCTGGTGAGCATCTTCACGCTGGTGGCGATGTCGGTGGACAGATACATCGCCGTGGTTCACTCCAAGCGCTCGCCCTGCATCCGAAACAAGAAGAACGCCTCGATCGGTGTGGCAGTGATCTGGGTGCTCTCCTTCGTCTTCGCCATCCCGGTGGCACAACACCAGACCATCACCAGCCACCAGGAAGCCCCCAACAGCTCGTTCTGCTGGGAGGAGTGGGCTGACAGCGCCACCAAACACACGTATAAAGTGACTATTTTGATCATTGGGTACCTGCTGCCCCTGGTGTTAATCACATGCTGTTATGCAAAGAGGGGACTGGAGCTGCCCTTGCTGGCTGTGTGGCAAGGTTGGCCCGAGTTCTCTGAGGTGTGCATCCGCAATGAGGCTCGGCTCTGA

Function


GO: NA

KEGG:

id description
K04230 GALR1; galanin receptor 1

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU77683 lncRNA upstream 5899 14241865 ~ 14288834 (+) True G62039
TU77670 lncRNA upstream 76352 14195784 ~ 14218381 (+) False AMCG00020273
TU77651 lncRNA upstream 156904 14137426 ~ 14137829 (+) True G62014
TU77650 lncRNA upstream 157797 14136420 ~ 14136936 (+) True G62013
TU77649 lncRNA upstream 158446 14135298 ~ 14136287 (+) True G62012
TU77711 lncRNA downstream 42297 14345296 ~ 14401302 (+) True G62062
TU77769 lncRNA downstream 251857 14554856 ~ 14621700 (+) True G62108
TU77775 lncRNA downstream 263720 14566719 ~ 14567438 (+) True G62114
TU77779 lncRNA downstream 274508 14577507 ~ 14578702 (+) True G62118
TU77862 lncRNA downstream 729043 15032042 ~ 15034083 (+) True G62185
AMCG00020272 mRNA upstream 22529 14261982 ~ 14272204 (+) True AMCG00020272
AMCG00020271 mRNA upstream 35573 14257572 ~ 14259160 (+) True AMCG00020271
AMCG00020273 mRNA upstream 62465 14206207 ~ 14232268 (+) True AMCG00020273
AMCG00020268 mRNA upstream 196084 14085133 ~ 14098649 (+) True AMCG00020268
AMCG00020266 mRNA upstream 239003 14052358 ~ 14055730 (+) True AMCG00020266
AMCG00020275 mRNA downstream 11393 14314392 ~ 14332409 (+) True AMCG00020275
AMCG00020276 mRNA downstream 36836 14339835 ~ 14383230 (+) True AMCG00020276
AMCG00020279 mRNA downstream 136079 14439078 ~ 14450651 (+) True AMCG00020279
AMCG00020280 mRNA downstream 148776 14451775 ~ 14461301 (+) True AMCG00020280
AMCG00020281 mRNA downstream 164853 14467852 ~ 14472545 (+) False AMCG00020281
TU77582 other upstream 343686 13948426 ~ 13951047 (+) True AMCG00020267
TU77503 other upstream 428170 13863477 ~ 13866563 (+) True AMCG00020255
TU77491 other upstream 459901 13833170 ~ 13834832 (+) True G61894
TU77200 other upstream 944021 13349677 ~ 13350712 (+) True G61675
TU76948 other upstream 1674916 12615792 ~ 12619817 (+) True G61491
TU77751 other downstream 164801 14467800 ~ 14469300 (+) True AMCG00020281
TU78405 other downstream 2511375 16814374 ~ 16815857 (+) True G62632
TU78611 other downstream 3156161 17459160 ~ 17471869 (+) True AMCG00020371
TU78735 other downstream 3625329 17928328 ~ 17928904 (+) True G62895
TU78775 other downstream 3755559 18058558 ~ 18061864 (+) True AMCG00020408

Expression Profile