RNA id: AMCG00020529



Basic Information


Item Value
RNA id AMCG00020529
length 462
RNA type mRNA
GC content 0.67
exon number 4
gene id AMCG00020529
representative False

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 24033037 ~ 24068457 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGGGGCTGCCTCCCCCCGCCCCACCACAGAAGACGCAGGCCAGGAGGACCCCCAAGGCCGACCAGTCACTCGCCACCACATCTGAACACTACGAATGcttcaattttcccACTGACTCTACTACACCACCTGCTGGAGCTGTAGTGGTTCAGGGCAGGAGCGCTGTGCTCAATCTGCGGCTCATCACAGAAACGCACGCATTCCTCATTGAAGCAGGTGTTGGAAAGTCTCACCTGAGCCCAGCTGAGAGGCGGTGGTCAGTGTCCGAGGGGCGCCGGCCCTCCAGGGCAGCCGGGCGGGCGCTGTGTGGGCCGGGCGGAGGAGCAGGGTCCGGGCGGCGGGGAGCTGTGCGGAGACGCAGCGCAGCGCCGCTCGCATCGCCATCTTCGCGCGTCTCTGACGGAGtgacgcacgcacgcacgcgcgCGCCCGTATCCCAGCCGCCTCAGCGCGCAGCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU79949 lncRNA upstream 162999 23898507 ~ 23899754 (+) True G63898
TU79937 lncRNA upstream 164998 23850350 ~ 23897755 (+) True G63890
TU79811 lncRNA upstream 975820 23086378 ~ 23086933 (+) True G63789
TU79809 lncRNA upstream 985440 23076901 ~ 23077313 (+) True G63787
TU79804 lncRNA upstream 992604 23068311 ~ 23070149 (+) True G63784
TU80010 lncRNA downstream 2259 24070716 ~ 24072160 (+) True G63947
TU80011 lncRNA downstream 6592 24075049 ~ 24076475 (+) True G63948
TU80015 lncRNA downstream 20057 24088514 ~ 24093237 (+) True G63951
TU80086 lncRNA downstream 164282 24232739 ~ 24242677 (+) True G64009
TU80136 lncRNA downstream 420447 24488904 ~ 24540707 (+) False G64048
AMCG00020528 mRNA upstream 78 24057094 ~ 24062675 (+) True AMCG00020528
AMCG00020522 mRNA upstream 91179 23925180 ~ 23971574 (+) True AMCG00020522
AMCG00020520 mRNA upstream 204950 23813512 ~ 23857803 (+) True AMCG00020520
AMCG00020517 mRNA upstream 380451 23657711 ~ 23682302 (+) True AMCG00020517
AMCG00020519 mRNA upstream 451607 23608590 ~ 23611146 (+) True AMCG00020519
AMCG00020530 mRNA downstream 91820 24160277 ~ 24163714 (+) True AMCG00020530
AMCG00020535 mRNA downstream 133857 24202314 ~ 24210374 (+) True AMCG00020535
AMCG00020536 mRNA downstream 147614 24216071 ~ 24225069 (+) True AMCG00020536
AMCG00020534 mRNA downstream 157544 24226001 ~ 24232399 (+) True AMCG00020534
AMCG00020532 mRNA downstream 177084 24245541 ~ 24249251 (+) True AMCG00020532
TU79996 other upstream 7161 24051989 ~ 24055592 (+) True G63939
TU79994 other upstream 8876 24051989 ~ 24053877 (+) False G63939
TU79808 other upstream 987808 23070411 ~ 23074945 (+) True G63786
TU79558 other upstream 1689993 22358828 ~ 22372760 (+) False AMCG00020487
TU79495 other upstream 1920596 22135368 ~ 22142157 (+) True AMCG00020470
TU80130 other downstream 410378 24478835 ~ 24482114 (+) True G64046
TU80333 other downstream 1005600 25074057 ~ 25076690 (+) True AMCG00020572
TU80336 other downstream 1009685 25078142 ~ 25084754 (+) False AMCG00020573
TU80525 other downstream 1482454 25550911 ~ 25553320 (+) True G64372
TU80958 other downstream 3347539 27415996 ~ 27418520 (+) True G64730

Expression Profile