RNA id: AMCG00020694


Basic Information

Item Value
RNA id AMCG00020694
length 537
RNA type mRNA
GC content 0.49
exon number 7
gene id AMCG00020694
representative False

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 30449745 ~ 30531136 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCAGCTTTAAAATACGCAGGTTTGGATGATACTGACAGTGAGGACGAGTTACCACCAGGCTGGGAAGAGAGATCTACAAAGGATGGATGGGTTTACTATGCAAACCATGAAGAGATGAAGACCCAATGGGAGCATCCAAAGACTGGAAAGAGGAGGCGTGTGGCTGGAGATCTACCATATGGATGGGAACAAGAAACTGATGACAAAGGCCAGATTTTCTATGTAGATCACATTAACAAGCGAACCACGTACTTTGATCCACGACTTGCCTTCACTGTGGAGGAAGTGGAGAAGCCCAACAACAAGCAGAGGTACGATGGAAACACATCTGCCCTGGAGATCCTGCAGGGTCGCGACCTCTCGGGGAAGGTGATCGTCGTAACTGGAGCCAATTCTGGGATAGGCAGCCGGCCTTTTTTAATCCTGAATGTCGTGCGATGTGAGGTATGGATCACAGTGGATAGGAGTAAGGACTTCCGTGCGTCTGACAGCACAGAGGGGGAAATGATGGTGaaaGATGAGACTGagcagTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81344 lncRNA downstream 58877 30126689 ~ 30390868 (-) True G65035
TU81342 lncRNA downstream 466380 29983113 ~ 29983365 (-) True G65033
TU81330 lncRNA downstream 563846 29885601 ~ 29885899 (-) True G65023
TU81290 lncRNA downstream 1135686 29259557 ~ 29314059 (-) True G64991
TU81189 lncRNA downstream 1450213 28996392 ~ 28999532 (-) False G64912
TU81361 lncRNA upstream 4472 30535292 ~ 30535896 (-) True G65050
TU81372 lncRNA upstream 86060 30616880 ~ 30617134 (-) True G65061
TU81379 lncRNA upstream 141925 30672745 ~ 30672962 (-) True G65068
TU81382 lncRNA upstream 162328 30693148 ~ 30693367 (-) True G65071
TU81384 lncRNA upstream 169666 30700486 ~ 30702173 (-) True G65073
AMCG00020693 mRNA downstream 29111 30365020 ~ 30420634 (-) True AMCG00020693
AMCG00020692 mRNA downstream 304218 30128219 ~ 30145527 (-) True AMCG00020692
AMCG00020685 mRNA downstream 916658 29520191 ~ 29533087 (-) True AMCG00020685
AMCG00020686 mRNA downstream 945333 29487288 ~ 29504412 (-) True AMCG00020686
AMCG00020680 mRNA downstream 981724 29464875 ~ 29468021 (-) True AMCG00020680
AMCG00020700 mRNA upstream 191963 30722783 ~ 30737976 (-) False AMCG00020700
AMCG00020699 mRNA upstream 227306 30758126 ~ 30760083 (-) True AMCG00020699
AMCG00020702 mRNA upstream 269762 30800582 ~ 30805327 (-) True AMCG00020702
AMCG00020706 mRNA upstream 608873 31139693 ~ 31143403 (-) True AMCG00020706
AMCG00020705 mRNA upstream 615267 31146087 ~ 31151972 (-) True AMCG00020705
TU81316 other downstream 916628 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 1044109 29381315 ~ 29405636 (-) True G65000
TU81155 other downstream 1652789 28788580 ~ 28796956 (-) True G64882
TU81116 other downstream 2121433 28325307 ~ 28328312 (-) False AMCG00020661
TU81066 other downstream 2220098 28226535 ~ 28229647 (-) True G64811
TU81423 other upstream 272414 30803234 ~ 30808846 (-) False AMCG00020702
TU81960 other upstream 1830415 32361235 ~ 32365142 (-) True G65549
TU82051 other upstream 2077042 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 2124314 32655134 ~ 32657019 (-) True G65641
TU82127 other upstream 2355544 32886364 ~ 32891493 (-) True G65679

Expression Profile