RNA id: TU81356



Basic Information


Item Value
RNA id TU81356
length 760
RNA type TUCP
GC content 0.46
exon number 4
gene id AMCG00020694
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 30449745 ~ 30531136 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTTAACTACCATGCAAGCAACATACGTCTCTGTATGGTTTCAACGCACAACCGAGGGAAAGACTACACGTCGGTATAGAACACGcaatgcaacattaaaataGAACTTCATTTCCCAGTTTACCCTTCGCTAATCTTTCTGACGTCAGGTTTTAATCCCGGAAGTGTCGCTAAAACAGTGCACACAACATATCAGTGCAGAGTGAGTTTTGCATTGTGACAGTCCCGAACACGCCACATAAACATTAGCGCTCATTAAACTGCTTGCACATCTCAAAATTTACGCAAGGTTGCAGAAAACCCCACAATAAGGCACTATGGCAGCTTTAAAATACGCAGGTTTGGATGATACTGACAGTGAGGACGAGTTACCACCAGGCTGGGAAGAGAGATCTACAAAGGATGGATGGGTTTACTATGCAAACCATGAAGAGATGAAGACCCAATGGGAGCATCCAAAGACTGGAAAGAGGAGGCGTGTGGCTGGAGATCTACCATATGGATGGGAACAAGAAACTGATGACAAAGGCCAGATTTTCTATGTAGATCACATTAACAAGCGAACCACGTACTTTGATCCACGACTTGCCTTCACTGTGGAGGAAGTGGAGAAGCCCAACAACAAGCAGAGGTACGATGGAAACACATCTGCCCTGGAGATCCTGCAGGGTCGCGACCTCTCGGGGAAGGTGATCGTCGTAACTGGAGCCAATTCTGGGATAGGTGAGCACTCCTTTAAAGCATGTCAGATCTTGAAAACT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81344 lncRNA downstream 132118 30126689 ~ 30390868 (-) True G65035
TU81342 lncRNA downstream 539621 29983113 ~ 29983365 (-) True G65033
TU81330 lncRNA downstream 637087 29885601 ~ 29885899 (-) True G65023
TU81290 lncRNA downstream 1208927 29259557 ~ 29314059 (-) True G64991
TU81188 lncRNA downstream 1521353 28996392 ~ 29001633 (-) True G64912
TU81361 lncRNA upstream 4156 30535292 ~ 30535896 (-) True G65050
TU81372 lncRNA upstream 85744 30616880 ~ 30617134 (-) True G65061
TU81379 lncRNA upstream 141609 30672745 ~ 30672962 (-) True G65068
TU81382 lncRNA upstream 162012 30693148 ~ 30693367 (-) True G65071
TU81384 lncRNA upstream 169350 30700486 ~ 30702173 (-) True G65073
AMCG00020693 mRNA downstream 102352 30365020 ~ 30420634 (-) True AMCG00020693
AMCG00020692 mRNA downstream 377459 30128219 ~ 30145527 (-) True AMCG00020692
AMCG00020685 mRNA downstream 989899 29520191 ~ 29533087 (-) True AMCG00020685
AMCG00020686 mRNA downstream 1018574 29487288 ~ 29504412 (-) True AMCG00020686
AMCG00020680 mRNA downstream 1054965 29464875 ~ 29468021 (-) True AMCG00020680
AMCG00020700 mRNA upstream 191647 30722783 ~ 30737976 (-) False AMCG00020700
AMCG00020699 mRNA upstream 226990 30758126 ~ 30760083 (-) True AMCG00020699
AMCG00020702 mRNA upstream 269446 30800582 ~ 30805327 (-) True AMCG00020702
AMCG00020706 mRNA upstream 608557 31139693 ~ 31143403 (-) True AMCG00020706
AMCG00020705 mRNA upstream 614951 31146087 ~ 31151972 (-) True AMCG00020705
TU81316 other downstream 989869 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 1117350 29381315 ~ 29405636 (-) True G65000
TU81155 other downstream 1726030 28788580 ~ 28796956 (-) True G64882
TU81116 other downstream 2194674 28325307 ~ 28328312 (-) False AMCG00020661
TU81066 other downstream 2293339 28226535 ~ 28229647 (-) True G64811
TU81423 other upstream 272098 30803234 ~ 30808846 (-) False AMCG00020702
TU81960 other upstream 1830099 32361235 ~ 32365142 (-) True G65549
TU82051 other upstream 2076726 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 2123998 32655134 ~ 32657019 (-) True G65641
TU82127 other upstream 2355228 32886364 ~ 32891493 (-) True G65679

Expression Profile