Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020707 |
| length | 1016 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | AMCG00020707 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 31152401 ~ 31155839 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1902600 | proton transmembrane transport | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| id | description |
|---|---|
| K02263 | COX4; cytochrome c oxidase subunit 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU81491 | lncRNA | upstream | 2640 | 31146087 ~ 31149761 (+) | True | G65163 |
| TU81378 | lncRNA | upstream | 450244 | 30700454 ~ 30702157 (+) | True | G65067 |
| TU81377 | lncRNA | upstream | 452147 | 30696959 ~ 30700254 (+) | False | AMCG00020695 |
| TU81374 | lncRNA | upstream | 503037 | 30648824 ~ 30649364 (+) | True | G65063 |
| TU81357 | lncRNA | upstream | 615837 | 30533193 ~ 30536564 (+) | True | AMCG00020697 |
| TU81557 | lncRNA | downstream | 327653 | 31483492 ~ 31484470 (+) | False | AMCG00020715 |
| TU81558 | lncRNA | downstream | 327653 | 31483492 ~ 31483922 (+) | False | AMCG00020715 |
| TU81570 | lncRNA | downstream | 329744 | 31485583 ~ 31485902 (+) | True | G65223 |
| TU81596 | lncRNA | downstream | 408994 | 31564833 ~ 31566359 (+) | True | G65246 |
| TU81619 | lncRNA | downstream | 479924 | 31635763 ~ 31636329 (+) | True | G65266 |
| AMCG00020704 | mRNA | upstream | 21012 | 31109024 ~ 31131389 (+) | True | AMCG00020704 |
| AMCG00020703 | mRNA | upstream | 314370 | 30835572 ~ 30838031 (+) | True | AMCG00020703 |
| AMCG00020701 | mRNA | upstream | 348884 | 30761959 ~ 30803517 (+) | True | AMCG00020701 |
| AMCG00020696 | mRNA | upstream | 396082 | 30747838 ~ 30756319 (+) | True | AMCG00020696 |
| AMCG00020698 | mRNA | upstream | 405814 | 30740123 ~ 30746587 (+) | True | AMCG00020698 |
| AMCG00020708 | mRNA | downstream | 46111 | 31201950 ~ 31215519 (+) | False | AMCG00020708 |
| AMCG00020709 | mRNA | downstream | 71283 | 31227122 ~ 31233624 (+) | True | AMCG00020709 |
| AMCG00020710 | mRNA | downstream | 257686 | 31413525 ~ 31419355 (+) | True | AMCG00020710 |
| AMCG00020715 | mRNA | downstream | 304475 | 31460314 ~ 31483706 (+) | False | AMCG00020715 |
| AMCG00020714 | mRNA | downstream | 340205 | 31496044 ~ 31503954 (+) | True | AMCG00020714 |
| TU81412 | other | upstream | 381474 | 30767024 ~ 30770927 (+) | True | G65100 |
| TU81277 | other | upstream | 1577055 | 29525715 ~ 29575346 (+) | False | AMCG00020684 |
| TU81272 | other | upstream | 1686689 | 29464564 ~ 29465712 (+) | True | G64979 |
| TU81182 | other | upstream | 2142800 | 29008663 ~ 29009601 (+) | True | G64908 |
| TU81160 | other | upstream | 2278329 | 28873630 ~ 28874072 (+) | True | G64887 |
| TU81504 | other | downstream | 6762 | 31162601 ~ 31217840 (+) | True | AMCG00020708 |
| TU81555 | other | downstream | 303663 | 31459502 ~ 31484470 (+) | True | AMCG00020715 |
| TU81717 | other | downstream | 707544 | 31863383 ~ 31864706 (+) | True | G65343 |
| TU81800 | other | downstream | 938185 | 32094024 ~ 32095186 (+) | True | AMCG00020742 |
| TU81825 | other | downstream | 1030775 | 32186614 ~ 32189381 (+) | True | G65433 |
