RNA id: AMCG00020713


Basic Information

Item Value
RNA id AMCG00020713
length 198
RNA type mRNA
GC content 0.51
exon number 3
gene id AMCG00020713
representative False

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31365663 ~ 31412823 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGGGACAGAATCACTTTCGTGTTTTAGTAACTTCCTCTGGGTCCTGCCATGGATCGAGGAATTatCTCACGCAATGAAGCACTGGTCTCCAAAGCAAGAGCACGGAAGCTGTGAAGTATCTCAGTACTTTTATGATTCCTTTAGGCGCTCTCGGCCGTGGGTGTCGGGGGAAGCTGTGAAAAACAGCGCTCGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81517 lncRNA downstream 145919 31219543 ~ 31219744 (-) True G65179
TU81516 lncRNA downstream 147778 31212938 ~ 31217885 (-) True G65178
TU81496 lncRNA downstream 209398 31152419 ~ 31156265 (-) True G65166
TU81427 lncRNA downstream 535121 30830181 ~ 30830542 (-) True G65109
TU81391 lncRNA downstream 627728 30730850 ~ 30737935 (-) False AMCG00020700
TU81567 lncRNA upstream 76808 31480756 ~ 31481969 (-) True G65221
TU81620 lncRNA upstream 244676 31648624 ~ 31648851 (-) True G65267
TU81656 lncRNA upstream 307586 31711534 ~ 31711764 (-) True G65297
TU81681 lncRNA upstream 352314 31756262 ~ 31756689 (-) True G65314
TU81682 lncRNA upstream 353503 31757451 ~ 31758500 (-) True G65315
AMCG00020705 mRNA downstream 213691 31146087 ~ 31151972 (-) True AMCG00020705
AMCG00020706 mRNA downstream 222260 31139693 ~ 31143403 (-) True AMCG00020706
AMCG00020702 mRNA downstream 560336 30800582 ~ 30805327 (-) True AMCG00020702
AMCG00020699 mRNA downstream 605580 30758126 ~ 30760083 (-) True AMCG00020699
AMCG00020700 mRNA downstream 627687 30722783 ~ 30737976 (-) False AMCG00020700
AMCG00020711 mRNA upstream 22573 31426521 ~ 31432953 (-) True AMCG00020711
AMCG00020712 mRNA upstream 31680 31435628 ~ 31448649 (-) True AMCG00020712
AMCG00020717 mRNA upstream 115277 31519225 ~ 31543659 (-) True AMCG00020717
AMCG00020716 mRNA upstream 140620 31544568 ~ 31545686 (-) True AMCG00020716
AMCG00020719 mRNA upstream 142425 31546373 ~ 31560989 (-) True AMCG00020719
TU81423 other downstream 556817 30803234 ~ 30808846 (-) False AMCG00020702
TU81356 other downstream 834527 30522986 ~ 30531136 (-) True AMCG00020694
TU81316 other downstream 1832546 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 1960027 29381315 ~ 29405636 (-) True G65000
TU81155 other downstream 2568707 28788580 ~ 28796956 (-) True G64882
TU81960 other upstream 957287 32361235 ~ 32365142 (-) True G65549
TU82051 other upstream 1203914 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 1251186 32655134 ~ 32657019 (-) True G65641
TU82127 other upstream 1482416 32886364 ~ 32891493 (-) True G65679
TU82216 other upstream 1964677 33368625 ~ 33369105 (-) True G65756

Expression Profile