RNA id: AMCG00020764


Basic Information

Item Value
RNA id AMCG00020764
length 1149
RNA type mRNA
GC content 0.58
exon number 10
gene id AMCG00020764
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 32374088 ~ 32378924 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cAGCAACGCAGCGCCGAGAGAAAGAGACGCATACAGAGTGATACAGAGACGTACAGAGACACTCATAGACAcgcacagagggagagagtgtgttgTGGCTGACGTGCGCAGTCGTGTGCTGTGACTGTGTGACTGGGTGTCGGGGGTCTCTGAGCGACACACTGTGGCTGAGCCTGTCAGGCGGGGGCCTCCATCTGCGAGAGCCGAGTGCTGAGAGCGGAGTGGGGTGTGGATGCTGTGTGCGTGAGCAGGATGGATGTGGGGCCAAACTGTGTGCAGATCGGAGAGAACAGGTTCATCAGCAAGACTGCGCTGCTGTCTAACCTCAAGACCTATAACCTGTACTACGAGGGTCAGACGCTGCagctgagacacagagagGAGGAGGATGAGCTGATAGTGGAGGGCCTGTTGAATATCTCCTGGGGGCTGCGCCGGCCAATCAGGCTTCAGATGCAGGATGACAACGAGCGAATCaaaccccctccctcctccacaTCCTGGCACTCGGGCTGCACCCTGGATGCACAGAGgAAAGAGGGCCCTCAGCTGGCCCCGCCTGCTATCGAGGTCACAGAGGCCGATGCCCAATCAGAGGAGAGCAGCGTGGTGAACgaggagggagagacagAAGAGTGCTCCCCCCAGCTGCTGCGGACCAAGAGTGACGCGGGGGTATGGCGGCGGGGGGGCGCGAGGAGGACCCCCAGCGACCAGCGCAGGATCAGACGCCACCGCTTCTCCATCAACGGACATTACTACAACCACAAGacgTCCGTATTCACTCCAGCTTTTGGCTCCGTCACCAACGTCCGCATCAACAGCACCATGACGACGCCGCAAGTCCTCAAACTGCTGCTCAACAAGTTCAAGATTGAGAATTCTGCAGACGAGTTTTCTCTCTACCTTGTGCACACCAGTGGTGAGCGTCAGAAGCTGAAGCGCTCAGACCGCCCCCTGGTGGTGAGGGTGCTGCAGGGCCCCTGTGAGCAGGTCAGCAAGATCTTCCTGATGGAGCAGGACCTGGGGGAGGAGGTCACCTACGATGTGGCTCAGTATATTAAGTTTGAGATGCCAGTGCTGCAGAGCTTCATCATGAAGttacaggaggaggaggatcgAGAAGTGCAGAAACTGAGGACCAAGTGA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process

KEGG:

id description
K09851 RASSF2_4; Ras association domain-containing protein 2/4

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81961 lncRNA downstream 8946 32358238 ~ 32365142 (-) False G65549
TU81873 lncRNA downstream 158331 32212727 ~ 32215757 (-) True G65468
TU81870 lncRNA downstream 186377 32186482 ~ 32187711 (-) True G65465
TU81868 lncRNA downstream 251255 32121885 ~ 32122833 (-) True AMCG00020746
TU81780 lncRNA downstream 312791 32058318 ~ 32061297 (-) True G65397
TU81987 lncRNA upstream 136479 32515403 ~ 32515617 (-) True G65571
TU82054 lncRNA upstream 175936 32554860 ~ 32556557 (-) True AMCG00020767
TU82055 lncRNA upstream 178641 32557565 ~ 32558864 (-) False AMCG00020767
TU82209 lncRNA upstream 895252 33274176 ~ 33274444 (-) True G65753
TU82240 lncRNA upstream 1426777 33805701 ~ 33852626 (-) True G65776
AMCG00020758 mRNA downstream 4370 32368118 ~ 32369718 (-) True AMCG00020758
AMCG00020757 mRNA downstream 82634 32289896 ~ 32291454 (-) True AMCG00020757
AMCG00020753 mRNA downstream 104355 32267146 ~ 32269733 (-) True AMCG00020753
AMCG00020752 mRNA downstream 129610 32234154 ~ 32244478 (-) True AMCG00020752
AMCG00020751 mRNA downstream 161595 32188550 ~ 32212493 (-) True AMCG00020751
AMCG00020761 mRNA upstream 6166 32385090 ~ 32396520 (-) True AMCG00020761
AMCG00020763 mRNA upstream 19511 32398435 ~ 32406525 (-) True AMCG00020763
AMCG00020760 mRNA upstream 60770 32439694 ~ 32443671 (-) True AMCG00020760
AMCG00020762 mRNA upstream 65330 32444254 ~ 32449876 (-) True AMCG00020762
AMCG00020765 mRNA upstream 76656 32455580 ~ 32462337 (-) True AMCG00020765
TU81960 other downstream 8946 32361235 ~ 32365142 (-) True G65549
TU81423 other downstream 1565242 30803234 ~ 30808846 (-) False AMCG00020702
TU81356 other downstream 1842952 30522986 ~ 30531136 (-) True AMCG00020694
TU81316 other downstream 2840971 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 2968452 29381315 ~ 29405636 (-) True G65000
TU82051 other upstream 228938 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 276210 32655134 ~ 32657019 (-) True G65641
TU82127 other upstream 507440 32886364 ~ 32891493 (-) True G65679
TU82216 other upstream 989701 33368625 ~ 33369105 (-) True G65756
TU82397 other upstream 1843391 34222315 ~ 34239697 (-) False AMCG00020810

Expression Profile