Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020809 |
| length | 1318 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 3 |
| gene id | AMCG00020809 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 34198498 ~ 34202915 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0045947 | negative regulation of translational initiation | biological_process |
| GO:0008190 | eukaryotic initiation factor 4E binding | molecular_function |
| id | description |
|---|---|
| K18644 | EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82308 | lncRNA | upstream | 135903 | 34062152 ~ 34062595 (+) | True | G65831 |
| TU82306 | lncRNA | upstream | 147461 | 34049994 ~ 34051037 (+) | True | G65829 |
| TU82117 | lncRNA | upstream | 1316380 | 32879099 ~ 32882118 (+) | True | G65670 |
| TU82043 | lncRNA | upstream | 1453763 | 32741200 ~ 32744735 (+) | False | AMCG00020783 |
| TU82018 | lncRNA | upstream | 1512178 | 32629723 ~ 32686320 (+) | False | G65594 |
| TU82357 | lncRNA | downstream | 19431 | 34222346 ~ 34261929 (+) | True | G65873 |
| TU82362 | lncRNA | downstream | 36974 | 34239889 ~ 34267100 (+) | True | G65877 |
| TU82380 | lncRNA | downstream | 213680 | 34416595 ~ 34480123 (+) | True | G65891 |
| TU82462 | lncRNA | downstream | 309742 | 34512657 ~ 34512879 (+) | True | G65954 |
| TU82464 | lncRNA | downstream | 311131 | 34514046 ~ 34515896 (+) | True | G65956 |
| AMCG00020806 | mRNA | upstream | 42987 | 34151480 ~ 34155511 (+) | True | AMCG00020806 |
| AMCG00020800 | mRNA | upstream | 158235 | 34033190 ~ 34040263 (+) | True | AMCG00020800 |
| AMCG00020799 | mRNA | upstream | 178539 | 34015287 ~ 34019959 (+) | True | AMCG00020799 |
| AMCG00020802 | mRNA | upstream | 191695 | 33999477 ~ 34006803 (+) | True | AMCG00020802 |
| AMCG00020801 | mRNA | upstream | 207685 | 33968192 ~ 33990813 (+) | True | AMCG00020801 |
| AMCG00020808 | mRNA | downstream | 30910 | 34233825 ~ 34238280 (+) | True | AMCG00020808 |
| AMCG00020814 | mRNA | downstream | 139776 | 34342691 ~ 34357137 (+) | True | AMCG00020814 |
| AMCG00020817 | mRNA | downstream | 190786 | 34393701 ~ 34402124 (+) | True | AMCG00020817 |
| AMCG00020820 | mRNA | downstream | 203671 | 34406586 ~ 34408796 (+) | False | AMCG00020820 |
| AMCG00020816 | mRNA | downstream | 210699 | 34413614 ~ 34418667 (+) | True | AMCG00020816 |
| TU82307 | other | upstream | 139033 | 34059111 ~ 34059465 (+) | True | G65830 |
| TU82274 | other | upstream | 238816 | 33954806 ~ 33959682 (+) | False | AMCG00020796 |
| TU82157 | other | upstream | 1090072 | 33107873 ~ 33108426 (+) | True | G65705 |
| TU82142 | other | upstream | 1209053 | 32946731 ~ 32989445 (+) | True | G65691 |
| TU82011 | other | upstream | 1604044 | 32592482 ~ 32594454 (+) | True | G65590 |
| TU82376 | other | downstream | 201619 | 34404534 ~ 34411620 (+) | True | AMCG00020820 |
| TU82530 | other | downstream | 581297 | 34784212 ~ 34787474 (+) | True | G66008 |
| TU82596 | other | downstream | 764929 | 34967844 ~ 35008322 (+) | True | G66060 |
| TU82706 | other | downstream | 960898 | 35163813 ~ 35164985 (+) | True | G66149 |
| TU82915 | other | downstream | 1544310 | 35747225 ~ 35750354 (+) | True | AMCG00020874 |
