Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020818 |
| length | 1306 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | AMCG00020818 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 34420834 ~ 34426849 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K22378 | RNF181; E3 ubiquitin-protein ligase RNF181 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82362 | lncRNA | upstream | 153734 | 34239889 ~ 34267100 (+) | True | G65877 |
| TU82357 | lncRNA | upstream | 158905 | 34222346 ~ 34261929 (+) | True | G65873 |
| TU82308 | lncRNA | upstream | 358239 | 34062152 ~ 34062595 (+) | True | G65831 |
| TU82306 | lncRNA | upstream | 369797 | 34049994 ~ 34051037 (+) | True | G65829 |
| TU82117 | lncRNA | upstream | 1538716 | 32879099 ~ 32882118 (+) | True | G65670 |
| TU82462 | lncRNA | downstream | 85808 | 34512657 ~ 34512879 (+) | True | G65954 |
| TU82464 | lncRNA | downstream | 87197 | 34514046 ~ 34515896 (+) | True | G65956 |
| TU82472 | lncRNA | downstream | 100018 | 34526867 ~ 34527075 (+) | True | G65962 |
| TU82489 | lncRNA | downstream | 250062 | 34676911 ~ 34732379 (+) | True | G65978 |
| TU82515 | lncRNA | downstream | 320044 | 34746893 ~ 34748114 (+) | True | G65994 |
| AMCG00020816 | mRNA | upstream | 2167 | 34413614 ~ 34418667 (+) | True | AMCG00020816 |
| AMCG00020820 | mRNA | upstream | 12038 | 34406586 ~ 34408796 (+) | False | AMCG00020820 |
| AMCG00020817 | mRNA | upstream | 18710 | 34393701 ~ 34402124 (+) | True | AMCG00020817 |
| AMCG00020814 | mRNA | upstream | 63697 | 34342691 ~ 34357137 (+) | True | AMCG00020814 |
| AMCG00020808 | mRNA | upstream | 182554 | 34233825 ~ 34238280 (+) | True | AMCG00020808 |
| AMCG00020823 | mRNA | downstream | 18430 | 34445279 ~ 34450197 (+) | True | AMCG00020823 |
| AMCG00020825 | mRNA | downstream | 23679 | 34450528 ~ 34451727 (+) | True | AMCG00020825 |
| AMCG00020824 | mRNA | downstream | 25362 | 34452211 ~ 34456901 (+) | True | AMCG00020824 |
| AMCG00020819 | mRNA | downstream | 35617 | 34462466 ~ 34475645 (+) | True | AMCG00020819 |
| AMCG00020827 | mRNA | downstream | 54530 | 34481379 ~ 34493390 (+) | True | AMCG00020827 |
| TU82376 | other | upstream | 9214 | 34404534 ~ 34411620 (+) | True | AMCG00020820 |
| TU82307 | other | upstream | 361369 | 34059111 ~ 34059465 (+) | True | G65830 |
| TU82274 | other | upstream | 461152 | 33954806 ~ 33959682 (+) | False | AMCG00020796 |
| TU82157 | other | upstream | 1312408 | 33107873 ~ 33108426 (+) | True | G65705 |
| TU82142 | other | upstream | 1431389 | 32946731 ~ 32989445 (+) | True | G65691 |
| TU82530 | other | downstream | 357363 | 34784212 ~ 34787474 (+) | True | G66008 |
| TU82596 | other | downstream | 540995 | 34967844 ~ 35008322 (+) | True | G66060 |
| TU82706 | other | downstream | 736964 | 35163813 ~ 35164985 (+) | True | G66149 |
| TU82915 | other | downstream | 1320376 | 35747225 ~ 35750354 (+) | True | AMCG00020874 |
| TU82978 | other | downstream | 1440544 | 35867393 ~ 35908402 (+) | True | G66362 |
