Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00020840 |
| length | 723 |
| RNA type | mRNA |
| GC content | 0.66 |
| exon number | 3 |
| gene id | AMCG00020840 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 34878690 ~ 34879805 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU82516 | lncRNA | upstream | 128539 | 34749498 ~ 34750151 (+) | True | G65995 |
| TU82517 | lncRNA | upstream | 129347 | 34749127 ~ 34749343 (+) | True | G65996 |
| TU82515 | lncRNA | upstream | 130576 | 34746893 ~ 34748114 (+) | True | G65994 |
| TU82489 | lncRNA | upstream | 146311 | 34676911 ~ 34732379 (+) | True | G65978 |
| TU82472 | lncRNA | upstream | 351615 | 34526867 ~ 34527075 (+) | True | G65962 |
| TU82612 | lncRNA | downstream | 145198 | 35025003 ~ 35026229 (+) | True | G66072 |
| TU82704 | lncRNA | downstream | 268409 | 35148214 ~ 35149418 (+) | True | AMCG00020855 |
| TU82709 | lncRNA | downstream | 287263 | 35167068 ~ 35170275 (+) | True | G66151 |
| TU82810 | lncRNA | downstream | 553463 | 35433268 ~ 35433558 (+) | True | G66231 |
| TU82838 | lncRNA | downstream | 673098 | 35552903 ~ 35553230 (+) | True | G66258 |
| AMCG00020835 | mRNA | upstream | 13328 | 34850662 ~ 34865362 (+) | True | AMCG00020835 |
| AMCG00020826 | mRNA | upstream | 376488 | 34498286 ~ 34502202 (+) | True | AMCG00020826 |
| AMCG00020827 | mRNA | upstream | 385300 | 34481379 ~ 34493390 (+) | True | AMCG00020827 |
| AMCG00020819 | mRNA | upstream | 403045 | 34462466 ~ 34475645 (+) | True | AMCG00020819 |
| AMCG00020824 | mRNA | upstream | 421789 | 34452211 ~ 34456901 (+) | True | AMCG00020824 |
| AMCG00020842 | mRNA | downstream | 1686 | 34881491 ~ 34892993 (+) | True | AMCG00020842 |
| AMCG00020844 | mRNA | downstream | 40013 | 34919818 ~ 34927630 (+) | True | AMCG00020844 |
| AMCG00020843 | mRNA | downstream | 55210 | 34935015 ~ 34936792 (+) | True | AMCG00020843 |
| AMCG00020841 | mRNA | downstream | 84817 | 34964622 ~ 34966485 (+) | True | AMCG00020841 |
| AMCG00020846 | mRNA | downstream | 98119 | 34977924 ~ 35005498 (+) | True | AMCG00020846 |
| TU82530 | other | upstream | 91216 | 34784212 ~ 34787474 (+) | True | G66008 |
| TU82376 | other | upstream | 467070 | 34404534 ~ 34411620 (+) | True | AMCG00020820 |
| TU82307 | other | upstream | 819225 | 34059111 ~ 34059465 (+) | True | G65830 |
| TU82274 | other | upstream | 919008 | 33954806 ~ 33959682 (+) | False | AMCG00020796 |
| TU82157 | other | upstream | 1770264 | 33107873 ~ 33108426 (+) | True | G65705 |
| TU82596 | other | downstream | 88039 | 34967844 ~ 35008322 (+) | True | G66060 |
| TU82706 | other | downstream | 284008 | 35163813 ~ 35164985 (+) | True | G66149 |
| TU82915 | other | downstream | 867420 | 35747225 ~ 35750354 (+) | True | AMCG00020874 |
| TU82978 | other | downstream | 987588 | 35867393 ~ 35908402 (+) | True | G66362 |
| TU83151 | other | downstream | 1374894 | 36254699 ~ 36256511 (+) | True | G66506 |
