RNA id: TU74673



Basic Information


Item Value
RNA id TU74673
length 388
lncRNA type inter_gene
GC content 0.61
exon number 1
gene id G59717
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3117522 ~ 3117909 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TGTGCAAGGAGTTGGGGCTGGGATGCTGTAGGGGTTCTGTGAAGAGTCTCGGCTGTGAGAGGTGAAGACGGGAGGGTACAGGTTTCTGCACTTACCCTTCCACTCACTGTTGGGGTCGGAGGCGAAGGTGTAGTAAATGGGCCCCACGATCTCGTTCATGCCCTGCACGTAGGCGATGCCCGGGTTCAGCTTGGCGTAGATGAACAGGATGCGCTCCACCACCTCCCAGTGCGCCTCGCAGCCGTTGGGCAGCACCTCATACTCGTTGGAGGGGTACAGATTCTGCGACTTCCCCGGGGAGCCCACCTGTGCCAGAGGACACCACCCACATCAGTGCCCTGCTCACACACGGACCGGCAACACCGACCGAGCCGCCCTCCTCATCACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74672 lncRNA upstream 70 3117214 ~ 3117452 (+) True G59716
TU74671 lncRNA upstream 703 3116518 ~ 3116819 (+) True G59715
TU74670 lncRNA upstream 7640 3107800 ~ 3109882 (+) True G59714
TU74654 lncRNA upstream 83181 3031878 ~ 3034341 (+) True G59700
TU74584 lncRNA upstream 147944 2962508 ~ 2969578 (+) False AMCG00019920
TU74674 lncRNA downstream 1903 3119812 ~ 3120189 (+) True G59718
TU74715 lncRNA downstream 81713 3199622 ~ 3200478 (+) True G59746
TU74799 lncRNA downstream 361871 3479780 ~ 3480109 (+) True G59800
TU74831 lncRNA downstream 530420 3648329 ~ 3651107 (+) True G59821
TU74848 lncRNA downstream 570891 3688800 ~ 3689000 (+) True G59835
AMCG00019924 mRNA upstream 86047 3024389 ~ 3031475 (+) True AMCG00019924
AMCG00019925 mRNA upstream 96745 3016234 ~ 3020777 (+) True AMCG00019925
AMCG00019926 mRNA upstream 112617 2995864 ~ 3004905 (+) True AMCG00019926
AMCG00019920 mRNA upstream 147927 2962511 ~ 2969595 (+) True AMCG00019920
AMCG00019921 mRNA upstream 198641 2910244 ~ 2918881 (+) True AMCG00019921
AMCG00019930 mRNA downstream 12020 3129929 ~ 3141283 (+) True AMCG00019930
AMCG00019929 mRNA downstream 24538 3142447 ~ 3147034 (+) True AMCG00019929
AMCG00019932 mRNA downstream 31185 3149094 ~ 3157541 (+) True AMCG00019932
AMCG00019931 mRNA downstream 40688 3158597 ~ 3161191 (+) True AMCG00019931
AMCG00019935 mRNA downstream 75878 3193787 ~ 3196215 (+) True AMCG00019935
TU74243 other upstream 2039459 1075504 ~ 1078063 (+) False AMCG00019884
TU74166 other upstream 2671992 441598 ~ 445530 (+) True G59305
TU74774 other downstream 123530 3241439 ~ 3250062 (+) False AMCG00019934
TU75012 other downstream 1705904 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 2237863 5355772 ~ 5361863 (+) True G60137
TU75235 other downstream 2240555 5358464 ~ 5359365 (+) True G60132
TU75390 other downstream 3064803 6182712 ~ 6186084 (+) False AMCG00020000

Expression Profile