RNA id: TU74849



Basic Information


Item Value
RNA id TU74849
length 341
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G59836
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3690835 ~ 3691175 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GAGACCACCTCAGACAGGAGTGAATGCAGCGTGGACAGCTCTCGGCCCAGATCGATGTAGCCCTCAAAGCCGGCCGTGTTGGAGATGGTTTCGGGGTTGGAGATCTCCAGCAGGAACCTCTGCATGTTGGTCCACTCGTGCTCCAGGAACTGGTTCATGAAGGACATGTACTCCTCCTTGCTGCCAAATCTGCCCAACAAACACCAGAACGCTTAAGTTAATAGCAAGGGATGTCCATCTGAGCTCTTCATCAGATGCTGTTGGTGAACAACATCAGTGTAACACAACATAAATGGGAACATACAATGTGAAACCACACTGACTATGAAGCAAAGATCTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU74848 lncRNA upstream 1835 3688800 ~ 3689000 (+) True G59835
TU74831 lncRNA upstream 39728 3648329 ~ 3651107 (+) True G59821
TU74799 lncRNA upstream 210726 3479780 ~ 3480109 (+) True G59800
TU74715 lncRNA upstream 490357 3199622 ~ 3200478 (+) True G59746
TU74674 lncRNA upstream 570646 3119812 ~ 3120189 (+) True G59718
TU74850 lncRNA downstream 570 3691745 ~ 3692036 (+) True G59837
TU74851 lncRNA downstream 1882 3693057 ~ 3693459 (+) True G59838
TU74853 lncRNA downstream 31716 3722891 ~ 3723446 (+) True G59840
TU74854 lncRNA downstream 37197 3728372 ~ 3728697 (+) True G59841
TU74858 lncRNA downstream 154824 3845999 ~ 3846430 (+) True G59845
AMCG00019948 mRNA upstream 92280 3583073 ~ 3598555 (+) True AMCG00019948
AMCG00019934 mRNA upstream 439428 3241308 ~ 3251407 (+) True AMCG00019934
AMCG00019936 mRNA upstream 456420 3211257 ~ 3234415 (+) True AMCG00019936
AMCG00019937 mRNA upstream 483479 3201986 ~ 3207356 (+) True AMCG00019937
AMCG00019935 mRNA upstream 494620 3193787 ~ 3196215 (+) True AMCG00019935
AMCG00019951 mRNA downstream 365320 4056495 ~ 4072047 (+) True AMCG00019951
AMCG00019959 mRNA downstream 833181 4524356 ~ 4555905 (+) True AMCG00019959
AMCG00019961 mRNA downstream 868131 4559306 ~ 4587941 (+) True AMCG00019961
AMCG00019958 mRNA downstream 912120 4603295 ~ 4621533 (+) True AMCG00019958
AMCG00019957 mRNA downstream 939866 4631041 ~ 4650566 (+) True AMCG00019957
TU74774 other upstream 440773 3241439 ~ 3250062 (+) False AMCG00019934
TU74243 other upstream 2612772 1075504 ~ 1078063 (+) False AMCG00019884
TU74166 other upstream 3245305 441598 ~ 445530 (+) True G59305
TU75012 other downstream 1132638 4823813 ~ 4835797 (+) False AMCG00019967
TU75242 other downstream 1664597 5355772 ~ 5361863 (+) True G60137
TU75235 other downstream 1667289 5358464 ~ 5359365 (+) True G60132
TU75390 other downstream 2491537 6182712 ~ 6186084 (+) False AMCG00020000
TU76237 other downstream 6092942 9784117 ~ 9788052 (+) True AMCG00020105

Expression Profile