RNA id: TU79873



Basic Information


Item Value
RNA id TU79873
length 237
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G63834
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 23194144 ~ 23194529 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCCTCCAAATATGTCAGTTATGGGGGTGCGAATGAAGTCTGCTTGTCGAGTTATGGAAGTCTTGTTTCGGGGTCCAACTTGTTCCCATTCATCCTCACTGCCTTCCTCCTCACCCTCTGCCATCTCCTCTTCAGCTCCTGGCTGGGAGTCTGGACCGTTTAAagtggaaacttttttttttttttttaaaTTTCTTCTTGTGGATTGATGAGTTTCTTTAGCGCCAGCATTTCCTCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU79863 lncRNA downstream 12037 23171808 ~ 23182107 (-) True G63829
TU79827 lncRNA downstream 123324 23070401 ~ 23070820 (-) True G63800
TU79818 lncRNA downstream 123842 23068319 ~ 23070302 (-) True G63791
TU79826 lncRNA downstream 125944 23062058 ~ 23068200 (-) True G63799
TU79682 lncRNA downstream 641561 22552382 ~ 22552583 (-) True G63685
TU79875 lncRNA upstream 8441 23202970 ~ 23205921 (-) True G63836
TU79897 lncRNA upstream 84263 23278792 ~ 23279073 (-) True G63858
TU79973 lncRNA upstream 718333 23912862 ~ 23913221 (-) True G63921
TU80090 lncRNA upstream 1038187 24232716 ~ 24233398 (-) True G64012
TU80091 lncRNA upstream 1039113 24233642 ~ 24235127 (-) True G64013
AMCG00020511 mRNA downstream 25377 23164437 ~ 23168767 (-) True AMCG00020511
AMCG00020509 mRNA downstream 107333 23070850 ~ 23086811 (-) True AMCG00020509
AMCG00020510 mRNA downstream 156330 23033583 ~ 23037814 (-) True AMCG00020510
AMCG00020501 mRNA downstream 215520 22975667 ~ 22978624 (-) True AMCG00020501
AMCG00020503 mRNA downstream 249530 22938797 ~ 22944614 (-) True AMCG00020503
AMCG00020516 mRNA upstream 71478 23266007 ~ 23276284 (-) True AMCG00020516
AMCG00020521 mRNA upstream 677885 23872414 ~ 23899771 (-) True AMCG00020521
AMCG00020523 mRNA upstream 725182 23919711 ~ 23923789 (-) True AMCG00020523
AMCG00020524 mRNA upstream 786831 23981360 ~ 23982883 (-) True AMCG00020524
AMCG00020525 mRNA upstream 799859 23994388 ~ 24015767 (-) True AMCG00020525
TU79847 other downstream 32244 23154692 ~ 23161900 (-) True G63819
TU79676 other downstream 649455 22543842 ~ 22544689 (-) True G63679
TU79413 other downstream 1881539 21312202 ~ 21312605 (-) True G63464
TU78822 other downstream 5154184 18037042 ~ 18039960 (-) False G62961
TU78814 other downstream 5178284 18006168 ~ 18015860 (-) True G62961
TU80215 other upstream 1482218 24676747 ~ 24677810 (-) False AMCG00020561
TU80345 other upstream 1916581 25111110 ~ 25112551 (-) True AMCG00020581
TU80367 other upstream 1926569 25121098 ~ 25139385 (-) False G64247
TU80385 other upstream 2014530 25209059 ~ 25211063 (-) True G64260
TU80401 other upstream 2047640 25242169 ~ 25242511 (-) True G64271

Expression Profile