RNA id: TU81361



Basic Information


Item Value
RNA id TU81361
length 331
lncRNA type inter_gene
GC content 0.39
exon number 2
gene id G65050
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 30535292 ~ 30535896 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATTTAATTGTAGATAAATACAACACATCAATACTGTACAATTGTTATAGATGACATAAAgaacacagaacagaacatgAAAGCATAGCATGGATCCTACCTGGCGCAACCATAATCTCATGTTTCTTTGATCTGATCCGGAGAAAGGTCAGATCATTCTGAGGATCCATGTCTCTCACTGTGCTTCTGGCTTTCATTGCGAGTTGATGTAACAGTCCGGCGTACTGCACAGTGGTGGAATTATCTAAAGTTGTTCTGATGGGGATTCTTCAGCATTTACTACTATTGTTCCAATTACTCCTTTGTGTGACTGGATTCTTTTTAGTGTTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81344 lncRNA downstream 144424 30126689 ~ 30390868 (-) True G65035
TU81342 lncRNA downstream 551927 29983113 ~ 29983365 (-) True G65033
TU81330 lncRNA downstream 649393 29885601 ~ 29885899 (-) True G65023
TU81290 lncRNA downstream 1221233 29259557 ~ 29314059 (-) True G64991
TU81189 lncRNA downstream 1535760 28996392 ~ 28999532 (-) False G64912
TU81372 lncRNA upstream 80984 30616880 ~ 30617134 (-) True G65061
TU81379 lncRNA upstream 136849 30672745 ~ 30672962 (-) True G65068
TU81382 lncRNA upstream 157252 30693148 ~ 30693367 (-) True G65071
TU81384 lncRNA upstream 164590 30700486 ~ 30702173 (-) True G65073
TU81391 lncRNA upstream 194954 30730850 ~ 30737935 (-) False AMCG00020700
AMCG00020694 mRNA downstream 4472 30449745 ~ 30530820 (-) False AMCG00020694
AMCG00020693 mRNA downstream 114658 30365020 ~ 30420634 (-) True AMCG00020693
AMCG00020692 mRNA downstream 389765 30128219 ~ 30145527 (-) True AMCG00020692
AMCG00020685 mRNA downstream 1002205 29520191 ~ 29533087 (-) True AMCG00020685
AMCG00020686 mRNA downstream 1030880 29487288 ~ 29504412 (-) True AMCG00020686
AMCG00020700 mRNA upstream 186887 30722783 ~ 30737976 (-) False AMCG00020700
AMCG00020699 mRNA upstream 222230 30758126 ~ 30760083 (-) True AMCG00020699
AMCG00020702 mRNA upstream 264686 30800582 ~ 30805327 (-) True AMCG00020702
AMCG00020706 mRNA upstream 603797 31139693 ~ 31143403 (-) True AMCG00020706
AMCG00020705 mRNA upstream 610191 31146087 ~ 31151972 (-) True AMCG00020705
TU81356 other downstream 4156 30522986 ~ 30531136 (-) True AMCG00020694
TU81316 other downstream 1002175 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 1129656 29381315 ~ 29405636 (-) True G65000
TU81155 other downstream 1738336 28788580 ~ 28796956 (-) True G64882
TU81116 other downstream 2206980 28325307 ~ 28328312 (-) False AMCG00020661
TU81423 other upstream 267338 30803234 ~ 30808846 (-) False AMCG00020702
TU81960 other upstream 1825339 32361235 ~ 32365142 (-) True G65549
TU82051 other upstream 2071966 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 2119238 32655134 ~ 32657019 (-) True G65641
TU82127 other upstream 2350468 32886364 ~ 32891493 (-) True G65679

Expression Profile