RNA id: TU81570



Basic Information


Item Value
RNA id TU81570
length 320
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G65223
representative True

Chromosome Information


Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31485583 ~ 31485902 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CGTGTTTTTAATTCGTATCgatgtgcaaaacaaatcaatgaacAATGCCCTAAAGTGATAGCATTAACCCGGTGAAAtcttatgttttgctttatctTATGTAGGTAAGCGATATTTTCAAAACgccagctttttgtttttgttttttacataaacGTAATCGTACGTGAAAAACAAGATAAACACACACTTACCATGATCTGAATGGATGTCAGTGATGCAGATGATGCTGAATTGTACTGCAGCTCAGTTTAAGCAGAAACgcgatgttgttgttttaactcGATGGTCGCATCACGGCCGGCCTGCGCCTAAACAAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU81557 lncRNA upstream 1113 31483492 ~ 31484470 (+) False AMCG00020715
TU81558 lncRNA upstream 1661 31483492 ~ 31483922 (+) False AMCG00020715
TU81491 lncRNA upstream 335822 31146087 ~ 31149761 (+) True G65163
TU81378 lncRNA upstream 783426 30700454 ~ 30702157 (+) True G65067
TU81377 lncRNA upstream 785329 30696959 ~ 30700254 (+) False AMCG00020695
TU81596 lncRNA downstream 78931 31564833 ~ 31566359 (+) True G65246
TU81619 lncRNA downstream 149861 31635763 ~ 31636329 (+) True G65266
TU81623 lncRNA downstream 171824 31657726 ~ 31659455 (+) True G65270
TU81629 lncRNA downstream 196212 31682114 ~ 31683154 (+) True G65276
TU81648 lncRNA downstream 225643 31711545 ~ 31711765 (+) True G65290
AMCG00020715 mRNA upstream 1877 31460314 ~ 31483706 (+) False AMCG00020715
AMCG00020710 mRNA upstream 66228 31413525 ~ 31419355 (+) True AMCG00020710
AMCG00020709 mRNA upstream 251959 31227122 ~ 31233624 (+) True AMCG00020709
AMCG00020708 mRNA upstream 270064 31201950 ~ 31215519 (+) False AMCG00020708
AMCG00020707 mRNA upstream 329744 31152401 ~ 31155839 (+) True AMCG00020707
AMCG00020714 mRNA downstream 10142 31496044 ~ 31503954 (+) True AMCG00020714
AMCG00020722 mRNA downstream 199227 31685129 ~ 31709788 (+) True AMCG00020722
AMCG00020723 mRNA downstream 227994 31713896 ~ 31720373 (+) True AMCG00020723
AMCG00020724 mRNA downstream 234960 31720862 ~ 31723055 (+) True AMCG00020724
AMCG00020729 mRNA downstream 240282 31726184 ~ 31753719 (+) True AMCG00020729
TU81555 other upstream 1113 31459502 ~ 31484470 (+) True AMCG00020715
TU81504 other upstream 267743 31162601 ~ 31217840 (+) True AMCG00020708
TU81412 other upstream 714656 30767024 ~ 30770927 (+) True G65100
TU81277 other upstream 1910237 29525715 ~ 29575346 (+) False AMCG00020684
TU81272 other upstream 2019871 29464564 ~ 29465712 (+) True G64979
TU81717 other downstream 377481 31863383 ~ 31864706 (+) True G65343
TU81800 other downstream 608122 32094024 ~ 32095186 (+) True AMCG00020742
TU81825 other downstream 700712 32186614 ~ 32189381 (+) True G65433
TU81856 other downstream 788384 32274286 ~ 32278972 (+) False AMCG00020748
TU82011 other downstream 1106580 32592482 ~ 32594454 (+) True G65590

Expression Profile