RNA id: TU81620


Basic Information

Item Value
RNA id TU81620
length 228
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G65267
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31648624 ~ 31648851 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GCCAGTTGGACATGCTGCTCAACAGAACTGCAGAACTGTGTGCTGAAGCCTGTTGCTGTGGGGGACATTAGTGTGCTCAAGGATAAATatctaatacatatataaagtattgatttttaagttgccttttttattttattttctgttttaatttgtgtgtataaaaaatGTTGACAACTTTTTATACTGATTGGGGATTTCttaataaacaaattgattAGTGATTaa

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81567 lncRNA downstream 166655 31480756 ~ 31481969 (-) True G65221
TU81542 lncRNA downstream 235801 31390924 ~ 31412823 (-) True AMCG00020713
TU81517 lncRNA downstream 428880 31219543 ~ 31219744 (-) True G65179
TU81516 lncRNA downstream 430739 31212938 ~ 31217885 (-) True G65178
TU81496 lncRNA downstream 492359 31152419 ~ 31156265 (-) True G65166
TU81656 lncRNA upstream 62683 31711534 ~ 31711764 (-) True G65297
TU81681 lncRNA upstream 107411 31756262 ~ 31756689 (-) True G65314
TU81682 lncRNA upstream 108600 31757451 ~ 31758500 (-) True G65315
TU81708 lncRNA upstream 136664 31785515 ~ 31803792 (-) True G65337
TU81780 lncRNA upstream 409467 32058318 ~ 32061297 (-) True G65397
AMCG00020720 mRNA downstream 16567 31606288 ~ 31632057 (-) True AMCG00020720
AMCG00020721 mRNA downstream 53719 31594228 ~ 31594905 (-) True AMCG00020721
AMCG00020718 mRNA downstream 74928 31564833 ~ 31573696 (-) True AMCG00020718
AMCG00020719 mRNA downstream 87635 31546373 ~ 31560989 (-) True AMCG00020719
AMCG00020716 mRNA downstream 102938 31544568 ~ 31545686 (-) True AMCG00020716
AMCG00020726 mRNA upstream 13786 31662637 ~ 31670494 (-) True AMCG00020726
AMCG00020725 mRNA upstream 74330 31723181 ~ 31725760 (-) True AMCG00020725
AMCG00020727 mRNA upstream 82406 31731257 ~ 31734972 (-) True AMCG00020727
AMCG00020735 mRNA upstream 248475 31897326 ~ 31914451 (-) True AMCG00020735
AMCG00020739 mRNA upstream 375471 32024322 ~ 32038155 (-) True AMCG00020739
TU81423 other downstream 839778 30803234 ~ 30808846 (-) False AMCG00020702
TU81356 other downstream 1117488 30522986 ~ 30531136 (-) True AMCG00020694
TU81316 other downstream 2115507 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 2242988 29381315 ~ 29405636 (-) True G65000
TU81155 other downstream 2851668 28788580 ~ 28796956 (-) True G64882
TU81960 other upstream 712384 32361235 ~ 32365142 (-) True G65549
TU82051 other upstream 959011 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 1006283 32655134 ~ 32657019 (-) True G65641
TU82127 other upstream 1237513 32886364 ~ 32891493 (-) True G65679
TU82216 other upstream 1719774 33368625 ~ 33369105 (-) True G65756

Expression Profile