RNA id: TU81656


Basic Information

Item Value
RNA id TU81656
length 231
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G65297
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 31711534 ~ 31711764 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

tcaaaattgcttaaatcacctttctttcccattcagacattcagtttggagttcaggagattgtcttgaccaggaccacacccctaaatgcattgaagcaactgccatgtgattggttggttagataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtgtatatatatatatatatatatatatatacatacatacacacacacacac

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU81620 lncRNA downstream 62683 31648624 ~ 31648851 (-) True G65267
TU81567 lncRNA downstream 229565 31480756 ~ 31481969 (-) True G65221
TU81542 lncRNA downstream 298711 31390924 ~ 31412823 (-) True AMCG00020713
TU81517 lncRNA downstream 491790 31219543 ~ 31219744 (-) True G65179
TU81516 lncRNA downstream 493649 31212938 ~ 31217885 (-) True G65178
TU81681 lncRNA upstream 44498 31756262 ~ 31756689 (-) True G65314
TU81682 lncRNA upstream 45687 31757451 ~ 31758500 (-) True G65315
TU81708 lncRNA upstream 73751 31785515 ~ 31803792 (-) True G65337
TU81780 lncRNA upstream 346554 32058318 ~ 32061297 (-) True G65397
TU81868 lncRNA upstream 410121 32121885 ~ 32122833 (-) True AMCG00020746
AMCG00020726 mRNA downstream 41040 31662637 ~ 31670494 (-) True AMCG00020726
AMCG00020720 mRNA downstream 79477 31606288 ~ 31632057 (-) True AMCG00020720
AMCG00020721 mRNA downstream 116629 31594228 ~ 31594905 (-) True AMCG00020721
AMCG00020718 mRNA downstream 137838 31564833 ~ 31573696 (-) True AMCG00020718
AMCG00020719 mRNA downstream 150545 31546373 ~ 31560989 (-) True AMCG00020719
AMCG00020725 mRNA upstream 11417 31723181 ~ 31725760 (-) True AMCG00020725
AMCG00020727 mRNA upstream 19493 31731257 ~ 31734972 (-) True AMCG00020727
AMCG00020735 mRNA upstream 185562 31897326 ~ 31914451 (-) True AMCG00020735
AMCG00020739 mRNA upstream 312558 32024322 ~ 32038155 (-) True AMCG00020739
AMCG00020745 mRNA upstream 359437 32071201 ~ 32083067 (-) True AMCG00020745
TU81423 other downstream 902688 30803234 ~ 30808846 (-) False AMCG00020702
TU81356 other downstream 1180398 30522986 ~ 30531136 (-) True AMCG00020694
TU81316 other downstream 2178417 29529919 ~ 29533117 (-) False AMCG00020685
TU81300 other downstream 2305898 29381315 ~ 29405636 (-) True G65000
TU81155 other downstream 2914578 28788580 ~ 28796956 (-) True G64882
TU81960 other upstream 649471 32361235 ~ 32365142 (-) True G65549
TU82051 other upstream 896098 32607862 ~ 32610695 (-) True AMCG00020774
TU82083 other upstream 943370 32655134 ~ 32657019 (-) True G65641
TU82127 other upstream 1174600 32886364 ~ 32891493 (-) True G65679
TU82216 other upstream 1656861 33368625 ~ 33369105 (-) True G65756

Expression Profile