RNA id: AMCG00021109


Basic Information

Item Value
RNA id AMCG00021109
length 498
RNA type mRNA
GC content 0.59
exon number 4
gene id AMCG00021109
representative True

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 3816693 ~ 3825283 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GAGGTTCTTCAGGTGGTCAGTTTTGGAGGCACCTATTTCAGACCCATCAAATCCAGCTTCACCAAGCAGCGCTATAACGATGTGTGGAAGGAGCTTCCAGAAGATTGTCTGGAAGGTCTTGATGTCCAAAAACAGGTGGCCTCTCCGAGCTACAGGCCGATGGTGAATGCTTACAAGGTGAAGTGTGGAGGCAGCCTGGAGATGTGGGAGAGCAGTGGGTGGATTGCTCCTCAGGACCCCTATGGCTGGTTCCAGTGGTACTGTAGGTTTTACCAGGGCCGCCGCTCGGCCAACGACCCGCGCCAGGTGGGCTGGTGGGAGAAGTGTGCCGGGGCGAATGGGCGCTGGAGGAGCAACCTCCTCACCAAGGTGCTGCACTCAGGCTGCGGCTGGGACAACCACGCGGTCTCTCCCACGGTGCGGCTGACACTCCAGCACTGGGGCTACCAGCTGACCGAAGAGGCCTACCAGCAGAGCAGCAAGAGAGTCAAGCCCAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU104320 lncRNA downstream 65791 3748658 ~ 3750902 (-) True G83608
TU104319 lncRNA downstream 69181 3747158 ~ 3747512 (-) True G83607
TU104311 lncRNA downstream 81486 3734677 ~ 3735207 (-) True G83602
TU104313 lncRNA downstream 81486 3734991 ~ 3735207 (-) False G83602
TU104305 lncRNA downstream 98503 3710153 ~ 3718190 (-) True G83596
TU104383 lncRNA upstream 295966 4121249 ~ 4121486 (-) True G83667
TU104389 lncRNA upstream 300208 4125491 ~ 4125701 (-) True G83673
TU104504 lncRNA upstream 877972 4703255 ~ 4751235 (-) True G83761
TU104507 lncRNA upstream 913813 4739096 ~ 4739884 (-) True G83764
TU104518 lncRNA upstream 996775 4822058 ~ 4859229 (-) True G83773
AMCG00021111 mRNA downstream 3650 3810411 ~ 3813043 (-) True AMCG00021111
AMCG00021110 mRNA downstream 15686 3779821 ~ 3801007 (-) True AMCG00021110
AMCG00021105 mRNA downstream 80340 3733756 ~ 3736353 (-) True AMCG00021105
AMCG00021092 mRNA downstream 527953 3287994 ~ 3288740 (-) True AMCG00021092
AMCG00021091 mRNA downstream 551482 3255379 ~ 3265211 (-) True AMCG00021091
AMCG00021115 mRNA upstream 411754 4237037 ~ 4260026 (-) True AMCG00021115
AMCG00021116 mRNA upstream 436746 4262029 ~ 4281357 (-) True AMCG00021116
AMCG00021118 mRNA upstream 457068 4282351 ~ 4291721 (-) True AMCG00021118
AMCG00021117 mRNA upstream 467308 4292591 ~ 4336712 (-) True AMCG00021117
AMCG00021120 mRNA upstream 523969 4349252 ~ 4351086 (-) True AMCG00021120
TU104173 other downstream 1134931 2681560 ~ 2681762 (-) False AMCG00021090
TU104110 other downstream 1357314 2457001 ~ 2459379 (-) True G83428
TU103965 other downstream 1838725 1973160 ~ 1977968 (-) True G83313
TU104502 other upstream 923498 4748781 ~ 4751235 (-) False G83761
TU104623 other upstream 2719209 6544492 ~ 6546577 (-) True G83864
TU105805 other upstream 8701810 12527093 ~ 12527694 (-) True G84814
TU105842 other upstream 8894581 12719864 ~ 12801586 (-) True AMCG00021259
TU105989 other upstream 9802052 13627335 ~ 13627747 (-) True G84952

Expression Profile