RNA id: TU101892



Basic Information


Item Value
RNA id TU101892
length 234
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G68908
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 9575421 ~ 9575654 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


taatgaagCGCAATTTACGCataattacttattatttaaaacaatattaatatgctgggatatttgaaaatatcCCCCCGATACAATGGTCGCTTGCTATCGAGGATAGAATGTATGTAAAATTGACACCTTAAAGAAATCTGTCCAAAATGTGTTCACAGCAGACACTTTCCAAATCTTTAGCAATCTTTAACAGACACTTTAGGTTATTACCCGAGAGACAAAGAGTACCGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU101881 lncRNA upstream 162686 9255332 ~ 9412735 (+) True G68901
TU101878 lncRNA upstream 334034 9240938 ~ 9241387 (+) True G68900
TU101875 lncRNA upstream 381118 9180904 ~ 9194303 (+) True G68897
TU101872 lncRNA upstream 390853 9180751 ~ 9184568 (+) True G68896
TU101871 lncRNA upstream 396495 9176324 ~ 9178926 (+) True G68895
TU102047 lncRNA downstream 314997 9890651 ~ 9891580 (+) True G69003
TU102091 lncRNA downstream 479842 10055496 ~ 10056501 (+) True G69028
TU102094 lncRNA downstream 485404 10061058 ~ 10061611 (+) True G69031
TU102095 lncRNA downstream 486031 10061685 ~ 10061887 (+) True G69032
TU102096 lncRNA downstream 486554 10062208 ~ 10062436 (+) True G69033
XM_043248061.1 mRNA upstream 667 9570400 ~ 9574754 (+) True hnmt
XM_043249639.1 mRNA upstream 8424 9443125 ~ 9566997 (+) True thsd7ba
XM_043249642.1 mRNA upstream 8424 9443125 ~ 9566997 (+) False thsd7ba
XM_043249641.1 mRNA upstream 8424 9443125 ~ 9566997 (+) False thsd7ba
XM_043249644.1 mRNA upstream 8424 9443125 ~ 9566997 (+) False thsd7ba
XM_043248969.1 mRNA downstream 26332 9601986 ~ 9610746 (+) True spopla
XM_043248971.1 mRNA downstream 26332 9601986 ~ 9610746 (+) False spopla
XM_043248970.1 mRNA downstream 26332 9601986 ~ 9610746 (+) False spopla
XM_043249259.1 mRNA downstream 52960 9628614 ~ 9652625 (+) False LOC122351877
XM_043249260.1 mRNA downstream 56367 9632021 ~ 9652625 (+) False LOC122351877
XR_006251853.1 other upstream 18774 9443125 ~ 9556647 (+) False thsd7ba
XR_006251841.1 other upstream 425755 9142592 ~ 9149666 (+) False si:ch1073-416j23.1
XR_006251842.1 other upstream 425760 9142592 ~ 9149661 (+) False si:ch1073-416j23.1
TU101764 other upstream 709524 8864649 ~ 8865897 (+) False cryba2b
TU101615 other upstream 1141938 8431145 ~ 8433483 (+) False sumo3b
XR_006251850.1 other downstream 753077 10328731 ~ 10395230 (+) False il1rapl1a
TU102754 other downstream 1907783 11483437 ~ 11489996 (+) False LOC122352020
TU102836 other downstream 2470845 12046499 ~ 12155804 (+) True G69527
TU103038 other downstream 3051881 12627535 ~ 12629535 (+) True G69670
XR_006251865.1 other downstream 3155182 12730836 ~ 12730962 (+) True LOC122352187

Expression Profile