RNA id: TU105298



Basic Information


Item Value
RNA id TU105298
length 221
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G71152
representative True

Chromosome Information


Item Value
chromosome id NC_056707.1
NCBI id CM032076.1
chromosome length 26426558
location 17593713 ~ 17593933 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTTTGATGAAACAGATTTGGACTAATCTATCGCTCTGCTCAGTCTCGACCTGTTATTCTTGCACCAAATGAGATCTTAATCACCGCATCGATTACACCTTATTTGTCAGAGAACAAACAAATGATCCTGCATGCGTCAAAGAGGATGGTTTTGAGCTAGCgtgaaaagaatgaaatataaaacggATGATTTCACAGTGTAGGtagaatatttgttttatg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU105295 lncRNA downstream 1530 17591964 ~ 17592183 (-) True G71149
TU105286 lncRNA downstream 225458 17364187 ~ 17368255 (-) False ncam2
XR_006251856.1 lncRNA downstream 242001 17343716 ~ 17351712 (-) True LOC122352115
TU105278 lncRNA downstream 252798 17340545 ~ 17340915 (-) True G71134
TU105275 lncRNA downstream 254183 17339120 ~ 17339530 (-) True G71131
TU105306 lncRNA upstream 9432 17603365 ~ 17603623 (-) True G71160
XR_006251765.1 lncRNA upstream 13608 17607541 ~ 17629953 (-) True LOC122351532
TU105331 lncRNA upstream 13998 17607931 ~ 17608190 (-) False LOC122351532
TU105332 lncRNA upstream 33601 17627534 ~ 17629009 (-) False LOC122351532
TU105340 lncRNA upstream 42462 17636395 ~ 17638217 (-) True G71181
XM_043248995.1 mRNA downstream 19339 17559528 ~ 17574374 (-) True zp2l1
XM_043248036.1 mRNA downstream 72153 17373161 ~ 17521560 (-) False ncam2
XM_043248035.1 mRNA downstream 72154 17364193 ~ 17521559 (-) False ncam2
XM_043248033.1 mRNA downstream 72154 17364193 ~ 17521559 (-) True ncam2
XM_043248530.1 mRNA downstream 277898 17299245 ~ 17315815 (-) False appb
XM_043248852.1 mRNA upstream 56042 17649975 ~ 17652121 (-) True dnajc28
XM_043249540.1 mRNA upstream 434421 18028354 ~ 18038668 (-) True ralba
XM_043249405.1 mRNA upstream 603193 18197126 ~ 18205461 (-) True hspbap1
XM_043248996.1 mRNA upstream 657303 18251236 ~ 18366267 (-) True sema5ba
XM_043249266.1 mRNA upstream 833139 18427072 ~ 18492873 (-) True adcy5
TU105258 other downstream 338222 17235872 ~ 17255491 (-) True G71118
TU104984 other downstream 769938 16817140 ~ 16823775 (-) True G70986
TU104983 other downstream 770019 16817140 ~ 16823694 (-) False G70986
TU104521 other downstream 1821849 15771421 ~ 15771864 (-) True G70663
XR_006251733.1 other downstream 2194276 15389849 ~ 15399437 (-) False tmtc4
XR_006251863.1 other upstream 975822 18569755 ~ 18569882 (-) True LOC122352185
TU106113 other upstream 2126565 19720498 ~ 19721737 (-) False ankar
TU106134 other upstream 2202324 19796257 ~ 19804599 (-) False glsb
XR_006251780.1 other upstream 2287891 19881824 ~ 19893315 (-) False mfsd6b
TU106614 other upstream 2895231 20489164 ~ 20503890 (-) False G71938

Expression Profile