RNA id: TU1667



Basic Information


Item Value
RNA id TU1667
length 253
lncRNA type inter_gene
GC content 0.43
exon number 1
gene id G1151
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5789667 ~ 5789919 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGGAGATTGACATAAAGAGGAGGAAACGATGTTTGAGGCTCTATATGTCATGTACAGAACTCTTATTATTTACCTATGCtaatataaatacagttttctATGACAAATTTTTGCACCTATTGAAGACATCAAAGCTTTGTACATTTGGGAGTGTACATGTATATGTGGTCTAATGTTATATTAAGCACGACAATATGTCGTTGACAGCTGGCACGACAGATAAGAACAAGAACATGTTGGGGTGGGGTGTTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1658 lncRNA downstream 11513 5777098 ~ 5778154 (-) True G1146
TU1622 lncRNA downstream 181749 5579526 ~ 5607918 (-) False G1117
TU1623 lncRNA downstream 181749 5603314 ~ 5607918 (-) True G1117
TU1624 lncRNA downstream 181749 5606603 ~ 5607918 (-) False G1117
TU1634 lncRNA downstream 222689 5561377 ~ 5566978 (-) True G1124
TU1797 lncRNA upstream 180471 5970390 ~ 5974062 (-) True G1240
TU1806 lncRNA upstream 230637 6020556 ~ 6020931 (-) True G1246
TU1809 lncRNA upstream 241977 6031896 ~ 6033999 (-) True G1248
TU1822 lncRNA upstream 272437 6062356 ~ 6063185 (-) True G1254
TU1825 lncRNA upstream 276392 6066311 ~ 6067614 (-) True G1257
XM_043242124.1 mRNA downstream 46 5784721 ~ 5789621 (-) True LOC122347093
XM_043242216.1 mRNA downstream 12721 5770703 ~ 5776946 (-) False LOC122347131
XM_043242209.1 mRNA downstream 12730 5770703 ~ 5776937 (-) True LOC122347131
XM_043241634.1 mRNA downstream 23589 5746470 ~ 5766078 (-) False radil
XM_043241583.1 mRNA upstream 2697 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241578.1 mRNA upstream 2697 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241569.1 mRNA upstream 2697 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241560.1 mRNA upstream 2697 5792616 ~ 5833693 (-) True si:dkeyp-9d4.3
XM_043241733.1 mRNA upstream 54225 5844144 ~ 5853249 (-) True LOC122346875
XR_006252050.1 other downstream 12010 5777571 ~ 5777657 (-) True LOC122353693
TU1193 other downstream 1490474 4298310 ~ 4299193 (-) True G820
TU1152 other downstream 1775380 4007840 ~ 4014287 (-) True G782
TU999 other downstream 3100203 2688765 ~ 2689464 (-) True G654
XR_006250784.1 other downstream 4184683 1594758 ~ 1604984 (-) False LOC122343438
XR_006251180.1 other upstream 56157 5846076 ~ 5853244 (-) False LOC122346875
TU1845 other upstream 321544 6111463 ~ 6113523 (-) True G1270
XR_006251170.1 other upstream 477744 6267663 ~ 6274751 (-) False si:ch211-14k19.8
XR_006251174.1 other upstream 668132 6458051 ~ 6468254 (-) False gaa2
TU2105 other upstream 749609 6539528 ~ 6541383 (-) False LOC122342514

Expression Profile