Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU563 |
| length | 254 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G380 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 1947033 ~ 1947420 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU560 | lncRNA | downstream | 4100 | 1941951 ~ 1942933 (-) | True | G378 |
| TU548 | lncRNA | downstream | 53843 | 1889976 ~ 1893190 (-) | True | G372 |
| TU528 | lncRNA | downstream | 79668 | 1866640 ~ 1867365 (-) | True | G358 |
| TU515 | lncRNA | downstream | 162521 | 1783195 ~ 1784512 (-) | True | G347 |
| TU454 | lncRNA | downstream | 362349 | 1583891 ~ 1584684 (-) | True | G304 |
| XR_006251817.1 | lncRNA | upstream | 44457 | 1991877 ~ 1997037 (-) | True | LOC122351936 |
| XR_006251658.1 | lncRNA | upstream | 65659 | 2013079 ~ 2017454 (-) | True | LOC122350950 |
| TU593 | lncRNA | upstream | 119117 | 2066537 ~ 2066858 (-) | True | G402 |
| TU879 | lncRNA | upstream | 222535 | 2169955 ~ 2173665 (-) | True | G584 |
| TU812 | lncRNA | upstream | 241081 | 2188501 ~ 2219729 (-) | True | G554 |
| XM_043262113.1 | mRNA | downstream | 334951 | 1605876 ~ 1612082 (-) | False | wu:fa56d06 |
| XM_043262747.1 | mRNA | downstream | 334951 | 1605876 ~ 1612082 (-) | False | wu:fa56d06 |
| XM_043263564.1 | mRNA | downstream | 334956 | 1605876 ~ 1612077 (-) | False | wu:fa56d06 |
| XM_043259232.1 | mRNA | downstream | 334958 | 1605876 ~ 1612075 (-) | False | wu:fa56d06 |
| XM_043261426.1 | mRNA | downstream | 334958 | 1605876 ~ 1612075 (-) | False | wu:fa56d06 |
| XM_043239674.1 | mRNA | upstream | 14894 | 1962314 ~ 1968862 (-) | False | n6amt1 |
| XM_043239665.1 | mRNA | upstream | 14894 | 1962314 ~ 1968862 (-) | True | n6amt1 |
| XM_043239683.1 | mRNA | upstream | 14894 | 1962314 ~ 1967111 (-) | False | n6amt1 |
| XM_043235994.1 | mRNA | upstream | 204231 | 2151651 ~ 2155943 (-) | True | LOC122342174 |
| XM_043247680.1 | mRNA | upstream | 276669 | 2224089 ~ 2235491 (-) | True | jam2a |
| XR_006250784.1 | other | downstream | 342049 | 1594758 ~ 1604984 (-) | False | LOC122343438 |
| XR_006252053.1 | other | downstream | 817396 | 1129499 ~ 1129637 (-) | True | LOC122353706 |
| XR_006252043.1 | other | downstream | 1319215 | 627700 ~ 627818 (-) | True | LOC122353666 |
| unassigned_transcript_1 | other | downstream | 1507905 | 439054 ~ 439128 (-) | True | trnag-gcc |
| TU105 | other | downstream | 1510908 | 435808 ~ 436125 (-) | True | G67 |
| TU999 | other | upstream | 741345 | 2688765 ~ 2689464 (-) | True | G654 |
| TU1152 | other | upstream | 2060420 | 4007840 ~ 4014287 (-) | True | G782 |
| TU1193 | other | upstream | 2350890 | 4298310 ~ 4299193 (-) | True | G820 |
| XR_006252050.1 | other | upstream | 3830151 | 5777571 ~ 5777657 (-) | True | LOC122353693 |
| XR_006251180.1 | other | upstream | 3898656 | 5846076 ~ 5853244 (-) | False | LOC122346875 |
