RNA id: XM_043239665.1



Basic Information


Item Value
RNA id XM_043239665.1
length 1325
RNA type mRNA
GC content 0.47
exon number 7
gene id n6amt1
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 1962314 ~ 1968862 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ACTTGCGACAGTAACCGGAAATGCTGCGTGCCGAGTCCACGCGCTGTTGTGTTTGAAAACCATGCGCTTGGAGCAGGCAGGGCCTTGCAGCTGTCATGTACCCGACTCCCCTGTACGCTCCGGCCGGCCGCGGCGCTTTCACAGACGTGTACGAACCGGCCGAAGACTCGTTCCTGCTGATGGACGCTCTGGAGAAGGATGCCGAGCGTCTGAAGGCAAGCAGGCCGGCGGTGTGTCTGGAGGTGGGCAGCGGGTCCGGAGCGGTCTCGGCGTTCCTGGCGTCTGTGCTCGGGCCCCAAGCGCTGTATCTcTGCACCGATGTGAACCCGGCGGCTGCGCAGTGCACACTACAGACAGCTCACTGCAACCACCTGCAGCTGCAGCCCGTCGTCACCGACCTGGCTGAGTGTTTTCTGCCGAGGCTGAAAGGAGAAGTGGACGTGCTTGTTTTCAATCCGCCGTACGTCGTCACGCCATCAGAGGAGGTGGGCAGTCGAGGGATCGAGGCGTCGTGGGCCGGAGGGATCCGCGGGCGAGAGGTGATGGATCGGATCTTTCCCATGATTCCTCAGCTGCTGTCGGATCACGGGGTGTTTTACCTGGTGACCGTCTCCGAGAACCACCCAGAAGAGATCGTGGAGGTGTTGGGCGGCTCAGGACTGAAGGGTCAGGTGTGTTTGAGTCGTCACGCCGGACGAGAGACGCTCTCTATACTGCGCTTCATACACTCTTCATCGCTCCTGTACTCCTCGTGATTCCTCGTTTGGGGGAGTTattattaaaagtgcattttatgcAAAACCGAGAGAGTCGTCGACTAACTCAAATAAAAGAACGGAAAGGGGTTGTTATAACTATCATCATTCGAAAGATGGAAGTGTTTCTTTTGCTATAAAATAAgggttttaatatttatatattttttcatttttgcttaaCATTTTAGTAGTGTTTTCGgtaacactaaaaataaagttcattagTTAGCAttggttattattgttatattaaactGCAGATTTAAATCTGTTATTAAATCTCTGGTTGTGTTAACATTAATGCACTGGGAGCTAACTAACGTTATCAGagaataatattacaaaagacaCCTTATTGTTGTGTTTACTGCGTTTTTCTTGGTTTTAGTGtcaacataaaagaaaaaagatttttttctattttttcatgttttttccaACATACTTTAATATGACGATATAAAgatggaaatattttttcttccaaaaattaaggtaaatgtgtttttgttggtgttttaGCTCTCTAGTTAAGAGATTGGAATAAAGCTGTTTTGATGTTCTTGA

Function


GO:

id name namespace
GO:0006479 protein methylation biological_process
GO:0003676 nucleic acid binding molecular_function
GO:0008276 protein methyltransferase activity molecular_function

KEGG:

id description
K19589 N6AMT1; release factor glutamine methyltransferase

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU563 lncRNA downstream 14894 1947033 ~ 1947420 (-) True G380
TU560 lncRNA downstream 19381 1941951 ~ 1942933 (-) True G378
TU548 lncRNA downstream 69124 1889976 ~ 1893190 (-) True G372
TU528 lncRNA downstream 94949 1866640 ~ 1867365 (-) True G358
TU515 lncRNA downstream 177802 1783195 ~ 1784512 (-) True G347
XR_006251817.1 lncRNA upstream 23015 1991877 ~ 1997037 (-) True LOC122351936
XR_006251658.1 lncRNA upstream 44217 2013079 ~ 2017454 (-) True LOC122350950
TU593 lncRNA upstream 97675 2066537 ~ 2066858 (-) True G402
TU879 lncRNA upstream 201093 2169955 ~ 2173665 (-) True G584
TU812 lncRNA upstream 219639 2188501 ~ 2219729 (-) True G554
XM_043262113.1 mRNA downstream 350232 1605876 ~ 1612082 (-) False wu:fa56d06
XM_043262747.1 mRNA downstream 350232 1605876 ~ 1612082 (-) False wu:fa56d06
XM_043263564.1 mRNA downstream 350237 1605876 ~ 1612077 (-) False wu:fa56d06
XM_043259232.1 mRNA downstream 350239 1605876 ~ 1612075 (-) False wu:fa56d06
XM_043261426.1 mRNA downstream 350239 1605876 ~ 1612075 (-) False wu:fa56d06
XM_043235994.1 mRNA upstream 182789 2151651 ~ 2155943 (-) True LOC122342174
XM_043247680.1 mRNA upstream 255227 2224089 ~ 2235491 (-) True jam2a
XM_043247686.1 mRNA upstream 255227 2224089 ~ 2235487 (-) False jam2a
XM_043245035.1 mRNA upstream 270276 2239138 ~ 2244571 (-) True mrpl39
XM_043247959.1 mRNA upstream 291855 2260717 ~ 2267466 (-) False LOC122351091
XR_006250784.1 other downstream 357330 1594758 ~ 1604984 (-) False LOC122343438
XR_006252053.1 other downstream 832677 1129499 ~ 1129637 (-) True LOC122353706
XR_006252043.1 other downstream 1334496 627700 ~ 627818 (-) True LOC122353666
unassigned_transcript_1 other downstream 1523186 439054 ~ 439128 (-) True trnag-gcc
TU105 other downstream 1526189 435808 ~ 436125 (-) True G67
TU999 other upstream 719903 2688765 ~ 2689464 (-) True G654
TU1152 other upstream 2038978 4007840 ~ 4014287 (-) True G782
TU1193 other upstream 2329448 4298310 ~ 4299193 (-) True G820
XR_006252050.1 other upstream 3808709 5777571 ~ 5777657 (-) True LOC122353693
XR_006251180.1 other upstream 3877214 5846076 ~ 5853244 (-) False LOC122346875

Expression Profile