RNA id: XM_043242124.1


Basic Information

Item Value
RNA id XM_043242124.1
length 1390
RNA type mRNA
GC content 0.39
exon number 7
gene id LOC122347093
representative True

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5784721 ~ 5789621 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgaaattgAAACAGACACCTCTATATAATGGTTCTGGGGGAGATCTGACTTTAATAGCTTAGGTTGAGGCAAAACAGCGGTGTTCCAGCGTAGAgctaatacaaatatattgggaaaaaaatgggATCATCAGAGTCAGTGCCGTTGCAAAATCCAGaacTGGATCAACCATGGAGGACATTTGACTGGGGacagaaAAAAGCCCTAAAAGAAAAGCTGGAAAACTTCACCCCGAGTCATCCAAATGTGAAGAACATCACGATCCTGGTAGCTGGAGAGATTGGAGCAGGGAAGTCCAGCTTTATTAACTCTATTGACAGTGCCTTTCAAAACCGGATCACTTCTAGAGCGCTGGTTAATTCAGCTGCCACTGGTCATAGTTTCACTCAAAAGCTCAAAGGATTCACCATCAGAAGTGGGACAAAAAATTTGCCCTTCGTCTTCAAGGACATCATGGGCCTGGAACCTAAAGCATTGGCTGGGTCACAAACAGAGGACATCATCAACGCTATGTATGGCCACGTGAAGGATGGCTATAAATTCAAAGAAGATAGGCCAATCTCTTGTGAGGATCAACAATACAGCCATGATCCCAGCCTCTCCGACCAGTCTTTCTGCCTGGTTTACGTCTTACCTTTAGATATGGTCCAATACACAGATGATCGTCTTATTGATAAGCTGACGATCATCCGCCAGAGAATCAGTGAAAAGGGTATTCCTCAAGTGATTGTCCTGACTAAAGTGGATGAAGCATGTCCGCTGGTCCAAAAGGATCTGAGGAAGGTCTACACTAGCAAGAAAATCAAGGAGAAGATGGAGTTGTGCAGTGCTAAAATAGGTGTACCAATGACAAACATTTTCCCTGTGAAGAACTACCACAATGAGATCAACACAGATGATAACACTGATATTCTGATACTAAAGGCACTTGAACAGATTGTTCAGACTGCTGATGACAGATTGCTGGATAATGAAAGCtactgacaaaaataataagcatgTCTTTGCTCATCACTGTGCATACCGTGAGCTCTCGCACTGATCTGAGATTTTCCCCTCAAACAGAagaaaatgatataataattcacaatataatgtgaacaaaaaaacaaacactttacaAATAGGCCAATAAATAATCCACATATCAGACTAAATTGCACTGCTTCAAAtcctttacattttaagatgttcagagtaataataatatacttgaataataataaatctattttacaCTAGGTACAAAAAATAGTTCCTCTCAGGACATTTAGgacaaaaaatgtgcatattgaAACTACTATTATTAACCACAGTGTCTGTAAAAGGATGCAATACTTTCATTCTGTTAGCAAGGCTTCAAAAATAAACTCTTTACTGTGTTATACCA

Function

GO:

id name namespace
GO:0005525 GTP binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1658 lncRNA downstream 6567 5777098 ~ 5778154 (-) True G1146
TU1622 lncRNA downstream 176803 5579526 ~ 5607918 (-) False G1117
TU1623 lncRNA downstream 176803 5603314 ~ 5607918 (-) True G1117
TU1624 lncRNA downstream 176803 5606603 ~ 5607918 (-) False G1117
TU1634 lncRNA downstream 217743 5561377 ~ 5566978 (-) True G1124
TU1667 lncRNA upstream 46 5789667 ~ 5789919 (-) True G1151
TU1797 lncRNA upstream 180769 5970390 ~ 5974062 (-) True G1240
TU1806 lncRNA upstream 230935 6020556 ~ 6020931 (-) True G1246
TU1809 lncRNA upstream 242275 6031896 ~ 6033999 (-) True G1248
TU1822 lncRNA upstream 272735 6062356 ~ 6063185 (-) True G1254
XM_043242216.1 mRNA downstream 7775 5770703 ~ 5776946 (-) False LOC122347131
XM_043242209.1 mRNA downstream 7784 5770703 ~ 5776937 (-) True LOC122347131
XM_043241616.1 mRNA downstream 18618 5746470 ~ 5766103 (-) False radil
XM_043241621.1 mRNA downstream 18642 5746470 ~ 5766079 (-) False radil
XM_043241634.1 mRNA downstream 18643 5746470 ~ 5766078 (-) False radil
XM_043241583.1 mRNA upstream 2995 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241578.1 mRNA upstream 2995 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241569.1 mRNA upstream 2995 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241560.1 mRNA upstream 2995 5792616 ~ 5833693 (-) True si:dkeyp-9d4.3
XM_043241733.1 mRNA upstream 54523 5844144 ~ 5853249 (-) True LOC122346875
XR_006252050.1 other downstream 7064 5777571 ~ 5777657 (-) True LOC122353693
TU1193 other downstream 1485528 4298310 ~ 4299193 (-) True G820
TU1152 other downstream 1770434 4007840 ~ 4014287 (-) True G782
TU999 other downstream 3095257 2688765 ~ 2689464 (-) True G654
XR_006250784.1 other downstream 4179737 1594758 ~ 1604984 (-) False LOC122343438
XR_006251180.1 other upstream 56455 5846076 ~ 5853244 (-) False LOC122346875
TU1845 other upstream 321842 6111463 ~ 6113523 (-) True G1270
XR_006251170.1 other upstream 478042 6267663 ~ 6274751 (-) False si:ch211-14k19.8
XR_006251174.1 other upstream 668430 6458051 ~ 6468254 (-) False gaa2
TU2105 other upstream 749907 6539528 ~ 6541383 (-) False LOC122342514

Expression Profile