Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_006251101.1 |
| length | 679 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 3 |
| gene id | LOC122346147 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056699.1 |
| NCBI id | CM032068.1 |
| chromosome length | 31761587 |
| location | 4619246 ~ 4623921 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0009063 | cellular amino acid catabolic process | biological_process |
| GO:0009078 | pyruvate family amino acid metabolic process | biological_process |
| GO:0009080 | pyruvate family amino acid catabolic process | biological_process |
| GO:1901605 | alpha-amino acid metabolic process | biological_process |
| GO:1901606 | alpha-amino acid catabolic process | biological_process |
| GO:0046395 | carboxylic acid catabolic process | biological_process |
| GO:0042851 | L-alanine metabolic process | biological_process |
| GO:0042853 | L-alanine catabolic process | biological_process |
| GO:0044282 | small molecule catabolic process | biological_process |
| GO:0042594 | response to starvation | biological_process |
| GO:0031667 | response to nutrient levels | biological_process |
| GO:0006522 | alanine metabolic process | biological_process |
| GO:0006524 | alanine catabolic process | biological_process |
| GO:0009991 | response to extracellular stimulus | biological_process |
| GO:0016054 | organic acid catabolic process | biological_process |
| GO:0005811 | lipid droplet | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1292 | lncRNA | downstream | 61748 | 4556369 ~ 4557498 (-) | True | G889 |
| TU1289 | lncRNA | downstream | 65974 | 4551569 ~ 4553272 (-) | True | G888 |
| TU1285 | lncRNA | downstream | 107861 | 4510794 ~ 4511385 (-) | True | G885 |
| TU1283 | lncRNA | downstream | 112687 | 4506278 ~ 4506559 (-) | True | G883 |
| TU1280 | lncRNA | downstream | 118458 | 4500557 ~ 4500788 (-) | True | G880 |
| TU1385 | lncRNA | upstream | 123569 | 4747490 ~ 4748885 (-) | True | G959 |
| XR_006251107.1 | lncRNA | upstream | 237080 | 4861001 ~ 4862965 (-) | True | LOC122346181 |
| TU1402 | lncRNA | upstream | 305443 | 4929364 ~ 4930701 (-) | True | G973 |
| TU1411 | lncRNA | upstream | 311799 | 4935720 ~ 4937688 (-) | True | G978 |
| TU1430 | lncRNA | upstream | 332457 | 4956378 ~ 4957056 (-) | False | mdh1b |
| XM_043240393.1 | mRNA | downstream | 619 | 4597080 ~ 4618627 (-) | True | fn1b |
| XM_043240404.1 | mRNA | downstream | 620 | 4597080 ~ 4618626 (-) | False | fn1b |
| XM_043240711.1 | mRNA | downstream | 44826 | 4569834 ~ 4574420 (-) | False | mnx2b |
| XM_043240702.1 | mRNA | downstream | 44826 | 4569834 ~ 4574420 (-) | True | mnx2b |
| XM_043240772.1 | mRNA | downstream | 72780 | 4531789 ~ 4546466 (-) | True | ndfip2 |
| XM_043240460.1 | mRNA | upstream | 49768 | 4673689 ~ 4739459 (-) | False | nrp2a |
| XM_043240468.1 | mRNA | upstream | 53874 | 4677795 ~ 4739460 (-) | True | nrp2a |
| XM_043240448.1 | mRNA | upstream | 141378 | 4765299 ~ 4896900 (-) | False | pard3ba |
| XM_043240440.1 | mRNA | upstream | 141378 | 4765299 ~ 4896900 (-) | True | pard3ba |
| XM_043240805.1 | mRNA | upstream | 332198 | 4956119 ~ 4960210 (-) | True | mdh1b |
| TU1193 | other | downstream | 320053 | 4298310 ~ 4299193 (-) | True | G820 |
| TU1152 | other | downstream | 604959 | 4007840 ~ 4014287 (-) | True | G782 |
| TU999 | other | downstream | 1929782 | 2688765 ~ 2689464 (-) | True | G654 |
| XR_006250784.1 | other | downstream | 3014262 | 1594758 ~ 1604984 (-) | False | LOC122343438 |
| XR_006252053.1 | other | downstream | 3489609 | 1129499 ~ 1129637 (-) | True | LOC122353706 |
| XR_006252050.1 | other | upstream | 1153650 | 5777571 ~ 5777657 (-) | True | LOC122353693 |
| XR_006251180.1 | other | upstream | 1222155 | 5846076 ~ 5853244 (-) | False | LOC122346875 |
| TU1845 | other | upstream | 1487542 | 6111463 ~ 6113523 (-) | True | G1270 |
| XR_006251170.1 | other | upstream | 1643742 | 6267663 ~ 6274751 (-) | False | si:ch211-14k19.8 |
| XR_006251174.1 | other | upstream | 1834130 | 6458051 ~ 6468254 (-) | False | gaa2 |
