RNA id: XR_006252050.1



Basic Information


Item Value
RNA id XR_006252050.1
length 87
RNA type snoRNA
GC content 0.43
exon number 1
gene id LOC122353693
representative True

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 5777571 ~ 5777657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGCCGCTGATGACTTTCACatacttttctgacacctcgtATGAACGCTGTATTACAGCAGCTGATTATATAGTCTATTCTGAGGCTC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1622 lncRNA downstream 169653 5579526 ~ 5607918 (-) False G1117
TU1623 lncRNA downstream 169653 5603314 ~ 5607918 (-) True G1117
TU1624 lncRNA downstream 169653 5606603 ~ 5607918 (-) False G1117
TU1634 lncRNA downstream 210593 5561377 ~ 5566978 (-) True G1124
TU1620 lncRNA downstream 216716 5560618 ~ 5560855 (-) True G1116
TU1667 lncRNA upstream 12010 5789667 ~ 5789919 (-) True G1151
TU1797 lncRNA upstream 192733 5970390 ~ 5974062 (-) True G1240
TU1806 lncRNA upstream 242899 6020556 ~ 6020931 (-) True G1246
TU1809 lncRNA upstream 254239 6031896 ~ 6033999 (-) True G1248
TU1822 lncRNA upstream 284699 6062356 ~ 6063185 (-) True G1254
XM_043242216.1 mRNA downstream 625 5770703 ~ 5776946 (-) False LOC122347131
XM_043242209.1 mRNA downstream 634 5770703 ~ 5776937 (-) True LOC122347131
XM_043241616.1 mRNA downstream 11468 5746470 ~ 5766103 (-) False radil
XM_043241621.1 mRNA downstream 11492 5746470 ~ 5766079 (-) False radil
XM_043241634.1 mRNA downstream 11493 5746470 ~ 5766078 (-) False radil
XM_043242124.1 mRNA upstream 7064 5784721 ~ 5789621 (-) True LOC122347093
XM_043241583.1 mRNA upstream 14959 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241578.1 mRNA upstream 14959 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241569.1 mRNA upstream 14959 5792616 ~ 5833693 (-) False si:dkeyp-9d4.3
XM_043241560.1 mRNA upstream 14959 5792616 ~ 5833693 (-) True si:dkeyp-9d4.3
TU1193 other downstream 1478378 4298310 ~ 4299193 (-) True G820
TU1152 other downstream 1763284 4007840 ~ 4014287 (-) True G782
TU999 other downstream 3088107 2688765 ~ 2689464 (-) True G654
XR_006250784.1 other downstream 4172587 1594758 ~ 1604984 (-) False LOC122343438
XR_006252053.1 other downstream 4647934 1129499 ~ 1129637 (-) True LOC122353706
XR_006251180.1 other upstream 68419 5846076 ~ 5853244 (-) False LOC122346875
TU1845 other upstream 333806 6111463 ~ 6113523 (-) True G1270
XR_006251170.1 other upstream 490006 6267663 ~ 6274751 (-) False si:ch211-14k19.8
XR_006251174.1 other upstream 680394 6458051 ~ 6468254 (-) False gaa2
TU2105 other upstream 761871 6539528 ~ 6541383 (-) False LOC122342514

Expression Profile