RNA id: XM_043250947.1


Basic Information

Item Value
RNA id XM_043250947.1
length 919
RNA type mRNA
GC content 0.43
exon number 5
gene id tmem126a
representative False

Chromosome Information

Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 11530837 ~ 11533005 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGCGGACCAATAGGAATCGCCGTATTGTTCCTGGATCTCGGGGTGAGAGTTGACTGAAACATGTGGTTAGACATGGCTGCGCCCTGCTGGCACTGAGGACCGTGACTGTTGAACACGGGTCGGAATAGTTTAGCGCTTATTTGAAAGCTCTTTCGCCGATCAACATGACAGACAACGGGATGTTTGTGAAAGAGACAGACATCCAGACATCATCCAGAGCGATGGTTATTAAAATTCTGAATAAGAAGTTTGAAAAACTCTCTAATACAGACAGAAACCTCTTTTCATACGGCCACATCTATATATCTGGCAACGCGGGGTTTGCTGGCTTGATTGCCAACAGCTTTTACAGACGAGCACTCAATATCACCCAAGGACGATTTACTTCCAGCCTTCCCATGGCCGTTCTTCCCTTTCTGACAACTGCAGCGTTTCACACTGCGTTCGTAACATACCCTTTAATGTCAGGTGACCTGAACTGCCAAAGCTGTGTCCTGATAAGAGGGGCTTTGGTTGGTGTAGTTGGTGGTGGCATATATCCTATTTTGTTGGCCTTACCTGTCAATGCTGGTCTTGCAGCCAGGTATAACAGTGCACCAATGCCAGAGAAGGGGAACATGATACGCTTTTGGACAAACATCAGCAAACCCATTGTAAAGAAGATGTATGCTGTTTTGTTGCTGCAGAGTTTATTTGGAGCCTACTTGAGCTCTAAGCAGTTTGGTATCTAcctaaaaatgctgaaaatgtccgATTCTGAAACTGAAGAGCTTCATGGTTAACcagttgttttatatttattttgatattgtaatttttttttttaaaacaagcgAAACGTGCTTTCCCAGTGCCTAACCTAGTCTCATCAGATCTGTTCTTGGTTTTGATGTCTGATCAATAAACAACATTCACTATA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU113502 lncRNA downstream 44409 11485906 ~ 11486428 (-) True G76693
TU113433 lncRNA downstream 239997 11218169 ~ 11290840 (-) True G76657
TU113438 lncRNA downstream 295147 11234372 ~ 11235690 (-) True G76662
TU113412 lncRNA downstream 420002 11096963 ~ 11110835 (-) True G76642
TU113395 lncRNA downstream 439776 11087586 ~ 11091061 (-) True G76627
TU113584 lncRNA upstream 169385 11701871 ~ 11766210 (-) False G76755
TU113585 lncRNA upstream 229231 11761717 ~ 11766210 (-) False G76755
TU113586 lncRNA upstream 229231 11761717 ~ 11766210 (-) False G76755
TU113587 lncRNA upstream 229231 11761717 ~ 11766210 (-) True G76755
TU113588 lncRNA upstream 229231 11761717 ~ 11766210 (-) False G76755
XM_043250114.1 mRNA downstream 20373 11506201 ~ 11510464 (-) True ccdc83
XM_043250856.1 mRNA downstream 63999 11458833 ~ 11466838 (-) True zpld1a
XM_043250117.1 mRNA downstream 73335 11452623 ~ 11457502 (-) True si:ch211-103f14.3
XM_043251131.1 mRNA downstream 180200 11290898 ~ 11350637 (-) False alcama
XM_043249836.1 mRNA upstream 176945 11709431 ~ 11711598 (-) True ift46
XM_043250759.1 mRNA upstream 181414 11713900 ~ 11719645 (-) True vps11
XM_043250890.1 mRNA upstream 198637 11731123 ~ 11744558 (-) True si:ch73-261i21.5
XM_043250357.1 mRNA upstream 214721 11747207 ~ 11748057 (-) True LOC122352762
XM_043250354.1 mRNA upstream 217479 11749965 ~ 11754201 (-) True zpr1
XR_006251915.1 other downstream 323585 11176569 ~ 11207252 (-) False LOC122352715
XR_006251918.1 other downstream 325610 11176569 ~ 11205227 (-) False LOC122352715
XR_006251917.1 other downstream 325611 11176569 ~ 11205226 (-) False LOC122352715
XR_006251916.1 other downstream 325611 11176569 ~ 11205226 (-) False LOC122352715
XR_006251914.1 other downstream 325611 11176569 ~ 11205226 (-) False LOC122352715
TU113815 other upstream 1249867 12782353 ~ 12789090 (-) True mogat2
XR_006251934.1 other upstream 2006243 13538729 ~ 13543615 (-) False sparta
TU114352 other upstream 2110805 13643291 ~ 13654379 (-) False ypel2a
TU114409 other upstream 2273633 13806119 ~ 13807640 (-) False ovca2
TU114554 other upstream 2669776 14202262 ~ 14204127 (-) True G77440

Expression Profile