RNA id: TU240127


Basic Information

Item Value
RNA id TU240127
length 545
lncRNA type sense_over
GC content 0.45
exon number 2
gene id G162193
representative True

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 11486930 ~ 11494948 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tgtgcgcgaaAGAAGCTCATTTCATCTCATTAATAGACATTTTCAGTGACGGTCTaagtttagaaatgtttctgtaaatatattaattgaagACGCATCACATATCGCGCCGCTGCTCGCTGCAAAAGAGAGCGCCGAAGAAAGTTTGCGAAGGCCGCATATACACCCCAGCCTCGCGTGAGTTCTGCTTCGACCAGAGAAGACTACAGAGTCGTTTTTCAGGAGACTGAGAGATCGTCGAGTCAGGGTCGCGAGGTGGAGGAGGATCGTCGTGGAGTTCGTTTGGCATGTTCCAGGACGGAGAAGTTCATCGGATTCGTGCAACGTCATGGAGGCTGTGCGTTTCATCTCATCGTTCATCAAGGGTCCGCGATTATTATTCCATGAGTGAAATCTAGTTCCCTGGATTCGTGAGTAACGTGTTACAGTTTTGTTTCATCACAAGAGCTCCAACTAGCGCGCCAACGTTGAACTGAAAATCCCAGCTGGGTAATATTGAGTTTTACAGGAactttgggttatttttatattttattttgtgtttt

Function

GO:

id name namespace
GO:0004359 glutaminase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU240009 lncRNA downstream 337514 11119706 ~ 11149416 (-) True G162102
TU239996 lncRNA downstream 476683 11009505 ~ 11010247 (-) False dpp6a
TU239999 lncRNA downstream 499227 10931520 ~ 10987703 (-) False dpp6a
TU239979 lncRNA downstream 932883 10553498 ~ 10554047 (-) True G162081
TU239901 lncRNA downstream 1040503 10446039 ~ 10446427 (-) True G162020
TU240142 lncRNA upstream 20890 11515838 ~ 11518808 (-) True G162204
TU240169 lncRNA upstream 31834 11526782 ~ 11528934 (-) True G162218
TU240177 lncRNA upstream 87232 11582180 ~ 11619080 (-) False txndc5
XR_006247920.1 lncRNA upstream 451072 11946020 ~ 11970270 (-) True LOC122329540
TU240346 lncRNA upstream 512858 12007806 ~ 12008305 (-) True G162349
XM_043226356.1 mRNA downstream 26102 11455225 ~ 11460828 (-) False syt5b
XM_043226357.1 mRNA downstream 26415 11455225 ~ 11460515 (-) True syt5b
XM_043226898.1 mRNA downstream 50243 11419019 ~ 11436687 (-) False atp6v0a1b
XM_043226896.1 mRNA downstream 50243 11419019 ~ 11436687 (-) True atp6v0a1b
XM_043226899.1 mRNA downstream 50243 11427705 ~ 11436687 (-) False atp6v0a1b
XM_043225604.1 mRNA upstream 1309 11496257 ~ 11499221 (-) True zgc:56095
XM_043225941.1 mRNA upstream 27793 11522741 ~ 11525442 (-) False si:dkey-197c15.6
XM_043225939.1 mRNA upstream 27793 11522741 ~ 11525442 (-) True si:dkey-197c15.6
XM_043226408.1 mRNA upstream 87184 11582132 ~ 11590013 (-) True txndc5
XM_043225632.1 mRNA upstream 111583 11606531 ~ 11609990 (-) True bloc1s5
TU240083 other downstream 134071 11352061 ~ 11352859 (-) True G162152
XR_006247939.1 other downstream 1028454 10451559 ~ 10458476 (-) False zgc:174877
XR_006247941.1 other downstream 1028454 10453998 ~ 10458476 (-) False zgc:174877
XR_006247940.1 other downstream 1028454 10454000 ~ 10458476 (-) False zgc:174877
TU239881 other downstream 1073462 10396084 ~ 10413468 (-) False myo3a
TU240376 other upstream 761869 12256817 ~ 12271146 (-) False mppe1
TU240507 other upstream 1340168 12835116 ~ 12888181 (-) False LOC122329483
TU240596 other upstream 1854306 13349254 ~ 13350231 (-) True G162538
TU240748 other upstream 2421209 13916157 ~ 13918920 (-) False trpa1b
TU240842 other upstream 2912827 14407775 ~ 14417383 (-) True ube2wb

Expression Profile