Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU583061 |
| length | 327 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G513972 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048570.1 |
| NCBI id | CM023224.2 |
| chromosome length | 101096859 |
| location | 46191446 ~ 46191772 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU583048 | lncRNA | downstream | 6759 | 46184418 ~ 46184687 (-) | True | G513960 |
| TU583043 | lncRNA | downstream | 10854 | 46179282 ~ 46180592 (-) | True | G513955 |
| TU583040 | lncRNA | downstream | 14785 | 46176384 ~ 46176661 (-) | True | G513952 |
| TU583039 | lncRNA | downstream | 15481 | 46175766 ~ 46175965 (-) | True | G513951 |
| TU583038 | lncRNA | downstream | 16390 | 46174787 ~ 46175056 (-) | True | G513950 |
| TU583062 | lncRNA | upstream | 193 | 46191965 ~ 46192186 (-) | True | G513973 |
| TU583063 | lncRNA | upstream | 558 | 46192330 ~ 46192880 (-) | True | G513974 |
| TU583064 | lncRNA | upstream | 1240 | 46193012 ~ 46193363 (-) | True | G513975 |
| TU583209 | lncRNA | upstream | 248792 | 46440564 ~ 46440942 (-) | True | G514111 |
| TU583211 | lncRNA | upstream | 250891 | 46442663 ~ 46442863 (-) | True | G514113 |
| XR_005052122.1 | mRNA | downstream | 196060 | 45973773 ~ 45995386 (-) | True | LOC110526039 |
| XR_005052123.1 | mRNA | downstream | 196061 | 45973773 ~ 45995385 (-) | False | LOC110526039 |
| XM_021606629.2 | mRNA | downstream | 236695 | 45915772 ~ 45954751 (-) | True | LOC110526038 |
| NM_001124347.2 | mRNA | downstream | 284287 | 45904066 ~ 45907159 (-) | True | LOC100136024 |
| XM_036979104.1 | mRNA | downstream | 284614 | 45904051 ~ 45906832 (-) | False | LOC100136024 |
| XM_021606635.2 | mRNA | upstream | 71349 | 46263121 ~ 46298544 (-) | False | apba1a |
| XM_021606631.2 | mRNA | upstream | 71349 | 46263121 ~ 46359982 (-) | False | apba1a |
| XM_021606632.2 | mRNA | upstream | 71349 | 46263121 ~ 46359982 (-) | False | apba1a |
| XM_021606633.2 | mRNA | upstream | 71349 | 46263121 ~ 46359982 (-) | False | apba1a |
| XM_021606637.2 | mRNA | upstream | 71349 | 46263121 ~ 46359982 (-) | False | apba1a |
| TU581656 | other | downstream | 915059 | 45274638 ~ 45276387 (-) | True | znrf3 |
| TU580171 | other | downstream | 1979623 | 44209465 ~ 44211823 (-) | False | nf2a |
| TU580173 | other | downstream | 1980781 | 44209338 ~ 44210665 (-) | False | nf2a |
| TU580172 | other | downstream | 1980781 | 44209465 ~ 44210665 (-) | True | nf2a |
| TU579749 | other | downstream | 2243057 | 43946338 ~ 43948389 (-) | True | prodhb |
| TU583050 | other | upstream | 168116 | 46359888 ~ 46360886 (-) | True | apba1a |
| TU583053 | other | upstream | 178918 | 46370690 ~ 46430360 (-) | True | LOC110526044 |
| TU583552 | other | upstream | 718886 | 46910658 ~ 46910950 (-) | True | G514434 |
| TU583955 | other | upstream | 824390 | 47016162 ~ 47016496 (-) | True | G514777 |
| TU584295 | other | upstream | 1783021 | 47974793 ~ 47976975 (-) | True | G515094 |
