RNA id: TU244451


Basic Information

Item Value
RNA id TU244451
length 380
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G180406
representative True

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36088438 ~ 36120437 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtctgtgtgtgtttgtgtgtctgtgtgtgtctgtgtgtctgtgtgtgtctgtgtctgtgtgtctgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtctgtctgtgtgtctgtctgtgtgtctgtctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtgtctgtgtctgtgtgtctgtctgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005636668.1 lncRNA upstream 3400 36115759 ~ 36116554 (+) True LOC120545344
TU244288 lncRNA upstream 65844 35556770 ~ 36054110 (+) False G180297
TU244389 lncRNA upstream 77527 35995973 ~ 36042427 (+) False G180366
TU244388 lncRNA upstream 96255 36002170 ~ 36023699 (+) True G180366
TU244432 lncRNA upstream 109717 36009361 ~ 36010237 (+) True G180387
TU244459 lncRNA downstream 222 36120659 ~ 36123008 (+) True G180409
TU244464 lncRNA downstream 5004 36125441 ~ 36126156 (+) True G180411
TU244465 lncRNA downstream 6562 36126999 ~ 36128999 (+) True G180412
TU244488 lncRNA downstream 111374 36231811 ~ 36311558 (+) True G180422
TU244493 lncRNA downstream 111374 36231811 ~ 36311558 (+) False G180422
XM_039779546.1 mRNA upstream 59431 36048606 ~ 36060523 (+) True LOC120545305
XM_039779562.1 mRNA upstream 460127 35645554 ~ 35659827 (+) True LOC120545314
XM_039779483.1 mRNA upstream 541350 35569647 ~ 35578604 (+) True LOC120545281
XM_039779565.1 mRNA upstream 626727 35488817 ~ 35493227 (+) True LOC120545316
XM_039779541.1 mRNA upstream 725827 35373617 ~ 35394127 (+) False LOC120545301
XM_039779493.1 mRNA downstream 103357 36223794 ~ 36265675 (+) False LOC120545287
XM_039779577.1 mRNA downstream 107863 36228300 ~ 36236912 (+) True LOC120545323
XM_039779492.1 mRNA downstream 135513 36255950 ~ 36265675 (+) True LOC120545287
XM_039779494.1 mRNA downstream 136620 36257057 ~ 36265675 (+) False LOC120545287
XM_039779090.1 mRNA downstream 199898 36320335 ~ 36323218 (+) False LOC120545105
TU244438 other upstream 61218 36058306 ~ 36058736 (+) False LOC120545305
TU244390 other upstream 101882 35850922 ~ 36018072 (+) False G180366
TU244424 other upstream 146893 35969766 ~ 35973061 (+) True G180382
TU244245 other upstream 1163988 34953064 ~ 34955966 (+) True G180268
TU244144 other upstream 1305044 34807258 ~ 34814910 (+) True G180216
TU244460 other downstream 2643 36123080 ~ 36125385 (+) False G180410
TU244462 other downstream 2643 36123080 ~ 36176371 (+) True G180410
TU244470 other downstream 56526 36176963 ~ 36177922 (+) True G180414
TU244471 other downstream 56903 36177340 ~ 36177922 (+) False G180414
TU244513 other downstream 199930 36320367 ~ 36323293 (+) True LOC120545105

Expression Profile