RNA id: TU113376



Basic Information


Item Value
RNA id TU113376
length 282
lncRNA type inter_gene
GC content 0.48
exon number 1
gene id G76618
representative True

Chromosome Information


Item Value
chromosome id NC_056708.1
NCBI id CM032077.1
chromosome length 16503406
location 10871806 ~ 10872087 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GTAACTCTGTGAAGCCTGCCAATTGGAAAGGCGAGCGAAACCGAGCGAATTTGTCTCTTGCCCAGATAGTTATATCGAGTCTCTGATCTCGGGGACCGAAGCCTTTGGTGAAATTCAAAACATCTCGCTTCAGAACGCGCGGCTCTgcagtgagtttgtgtgttttatttcccACTGAATCAAAGCAAGCTGTGCTGCAAATCGTGTTGTCAGCGTAGGCCGACTGAACTGGCAAAAGCTATTTACAGACGCTTGCAATCAAATCACCATATTTCAGCCCCG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU113180 lncRNA downstream 411407 10436192 ~ 10460399 (-) True G76489
TU113191 lncRNA downstream 415294 10455591 ~ 10456512 (-) True G76493
TU113174 lncRNA downstream 426650 10424615 ~ 10445156 (-) True G76488
TU113138 lncRNA downstream 459968 10403957 ~ 10411838 (-) True G76458
TU113081 lncRNA downstream 554406 10317071 ~ 10317400 (-) True G76426
XR_006251956.1 lncRNA upstream 74945 10947032 ~ 10950467 (-) True LOC122353057
TU113386 lncRNA upstream 87849 10959936 ~ 10987235 (-) False G76622
TU113385 lncRNA upstream 89073 10961160 ~ 10987235 (-) False G76622
TU113383 lncRNA upstream 114312 10986399 ~ 10987235 (-) True G76622
TU113387 lncRNA upstream 114312 10986399 ~ 10987235 (-) False G76622
XM_043250831.1 mRNA downstream 108909 10481653 ~ 10762897 (-) False auts2a
XM_043250826.1 mRNA downstream 108910 10481653 ~ 10762896 (-) False auts2a
XM_043250828.1 mRNA downstream 108910 10481653 ~ 10762896 (-) False auts2a
XM_043250830.1 mRNA downstream 108910 10481653 ~ 10762896 (-) False auts2a
XM_043250827.1 mRNA downstream 108910 10481653 ~ 10762896 (-) False auts2a
XM_043251066.1 mRNA upstream 1725 10873812 ~ 10891764 (-) False ints2
XM_043251065.1 mRNA upstream 1725 10873812 ~ 10891764 (-) True ints2
XM_043250187.1 mRNA upstream 20706 10892793 ~ 10945715 (-) True med13a
XM_043249941.1 mRNA upstream 100794 10972881 ~ 10983737 (-) False rps6kb1a
XM_043249940.1 mRNA upstream 100794 10972881 ~ 10983736 (-) True rps6kb1a
TU113196 other downstream 391617 10478059 ~ 10480189 (-) True G76498
TU113101 other downstream 488497 10380096 ~ 10383309 (-) True G76438
TU113103 other downstream 488497 10380096 ~ 10383309 (-) False G76438
TU113102 other downstream 490759 10380096 ~ 10381047 (-) False G76438
TU113078 other downstream 594105 10267354 ~ 10277701 (-) True fgf13b
XR_006251870.1 other upstream 104241 10976328 ~ 10983737 (-) False rps6kb1a
XR_006251871.1 other upstream 105849 10977936 ~ 10983738 (-) False rps6kb1a
TU113393 other upstream 145023 11017110 ~ 11038731 (-) True G76625
XR_006251915.1 other upstream 304482 11176569 ~ 11207252 (-) False LOC122352715
XR_006251918.1 other upstream 304482 11176569 ~ 11205227 (-) False LOC122352715

Expression Profile