CELL TYPE: Chondrocytes


Distribution of Chondrocytes in Tissues/Organs

Word Cloud of All Markers


Function



  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Chondrocytes.


  • Detail Marker Information in Datasets


    Dataset ID Species Tissue / Organ Cell cluster Cell type Experiment type Sample Marker gene Marker class Evidence
    GSE158142 (5dpf) Danio rerio brain, eye 4 Chondrocytes baseline 5dpf, untreatment ENSDARG00000105223 (pmp22a) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (5dpf) Danio rerio brain, eye 4 Chondrocytes baseline 5dpf, untreatment ENSDARG00000019949 (serpinh1b) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (5dpf) Danio rerio brain, eye 4 Chondrocytes baseline 5dpf, untreatment ENSDARG00000059367 (mfap2) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (5dpf) Danio rerio brain, eye 4 Chondrocytes baseline 5dpf, untreatment ENSDARG00000017676 (mmp2) marker DOI:10.1016/j.neuron.2020.09.023
    GSE151354 (wild type) Danio rerio cartilage 1 Chondrocytes baseline 21dpf, wild type ENSDARG00000069093 (col2a1a) marker DOI:10.7554/eLife.16415
    GSE151354 (wild type) Danio rerio cartilage 1 Chondrocytes baseline 21dpf, wild type ENSDARG00000073699 (col9a1a) marker DOI:10.7554/eLife.16415
    GSE151354 (wild type) Danio rerio cartilage 3 Chondrocytes baseline 21dpf, wild type ENSDARG00000069093 (col2a1a) marker DOI:10.7554/eLife.16415
    GSE151354 (wild type) Danio rerio cartilage 3 Chondrocytes baseline 21dpf, wild type ENSDARG00000073699 (col9a1a) marker DOI:10.7554/eLife.16415
    GSE151354 (nkx3.2 mutant) Danio rerio cartilage 1 Chondrocytes growth 21dpf, nkx3.2 mutant ENSDARG00000069093 (col2a1a) marker DOI:10.7554/eLife.16415
    GSE151354 (nkx3.2 mutant) Danio rerio cartilage 1 Chondrocytes growth 21dpf, nkx3.2 mutant ENSDARG00000073699 (col9a1a) marker DOI:10.7554/eLife.16415
    GSE151354 (nkx3.2 mutant) Danio rerio cartilage 2 Chondrocytes growth 21dpf, nkx3.2 mutant ENSDARG00000073699 (col9a1a) marker DOI:10.7554/eLife.16415
    GSE144944 (fgfr3 +|+) Danio rerio cranial vault 2 Chondrocytes baseline 1mpf, fgfr3 +/+ ENSDARG00000011407 (col2a1b) marker DOI:10.1002/jbmr.4042
    GSE144944 (fgfr3 +|+) Danio rerio cranial vault 3 Chondrocytes baseline 1mpf, fgfr3 +/+ ENSDARG00000011407 (col2a1b) marker DOI:10.1002/jbmr.4042
    GSE144944 (fgfr3 +|+) Danio rerio cranial vault 5 Chondrocytes baseline 1mpf, fgfr3 +/+ ENSDARG00000011407 (col2a1b) marker DOI:10.1002/jbmr.4042
    GSE144944 (fgfr3 -|-) Danio rerio cranial vault 2 Chondrocytes growth 1mpf, fgfr3 -/- ENSDARG00000011407 (col2a1b) marker DOI:10.1002/jbmr.4042
    GSE144944 (fgfr3 -|-) Danio rerio cranial vault 6 Chondrocytes growth 1mpf, fgfr3 -/- ENSDARG00000011407 (col2a1b) marker DOI:10.1002/jbmr.4042
    PRJNA564810 (5dpf) Danio rerio embryo 6 Chondrocytes baseline 5dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000073699 (col9a1a) marker DOI:10.7554/eLife.16415
    PRJNA564810 (2dpf) Danio rerio embryo 5 Chondrocytes baseline 2dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000073699 (col9a1a) marker DOI:10.7554/eLife.16415
    PRJNA797645 Gasterosteus aculeatus embryo 18 Chondrocytes baseline 70 hpf, whole embryo, untreatment ENSGACG00000014845 (olfml2bb) marker DOI:10.1002/jbmr.4042
    GSE158142 (1.5dpf) Danio rerio head 7 Chondrocytes baseline 1.5dpf, untreatment -- (lect1) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (1.5dpf) Danio rerio head 7 Chondrocytes baseline 1.5dpf, untreatment ENSDARG00000015947 (matn4) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (1.5dpf) Danio rerio head 7 Chondrocytes baseline 1.5dpf, untreatment ENSDARG00000037845 (col9a3) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (1.5dpf) Danio rerio head 7 Chondrocytes baseline 1.5dpf, untreatment ENSDARG00000073699 (col9a1a) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (2dpf) Danio rerio head 6 Chondrocytes baseline 2dpf, untreatment ENSDARG00000038056 (fgfbp2b) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (2dpf) Danio rerio head 6 Chondrocytes baseline 2dpf, untreatment ENSDARG00000037845 (col9a3) marker DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (3dpf) Danio rerio head 5 Chondrocytes baseline 3dpf, untreatment -- (lect1) marker DOI:10.1016/j.neuron.2020.09.023
    GSE150498 (untreated ctrl) Danio rerio intestine 2 Chondrocytes baseline 6dpf, untreated ctrl ENSDARG00000093381 (tgm2l) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (untreated ctrl) Danio rerio intestine 2 Chondrocytes baseline 6dpf, untreated ctrl ENSDARG00000059391 (gyg1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (DSS treated) Danio rerio intestine 13 Chondrocytes disease 6dpf, DSS treated ENSDARG00000073699 (col9a1a) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (DSS treated) Danio rerio intestine 13 Chondrocytes disease 6dpf, DSS treated ENSDARG00000093381 (tgm2l) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 1X DSS) Danio rerio intestine 7 Chondrocytes disease 6dpf, wildtype, 1X DSS ENSDARG00000073699 (col9a1a) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 1X DSS) Danio rerio intestine 7 Chondrocytes disease 6dpf, wildtype, 1X DSS ENSDARG00000093381 (tgm2l) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 1X DSS) Danio rerio intestine 7 Chondrocytes disease 6dpf, wildtype, 1X DSS ENSDARG00000059391 (gyg1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 1X DSS) Danio rerio intestine 15 Chondrocytes disease 6dpf, nod2-/-, 1X DSS ENSDARG00000093381 (tgm2l) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 1X DSS) Danio rerio intestine 15 Chondrocytes disease 6dpf, nod2-/-, 1X DSS ENSDARG00000059391 (gyg1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 2X DSS) Danio rerio intestine 11 Chondrocytes disease 6dpf, wildtype, 2X DSS ENSDARG00000059391 (gyg1b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS) Danio rerio intestine 4 Chondrocytes disease 6dpf, nod2-/-, 2X DSS ENSDARG00000093381 (tgm2l) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS) Danio rerio intestine 4 Chondrocytes disease 6dpf, nod2-/-, 2X DSS ENSDARG00000059391 (gyg1b) marker DOI:10.1038/s41586-021-03484-5
    GSE175406 Mastacembelus armatus ovotestes 1 Chondrocytes baseline The ovotestes of three individual 2-year-old zig-zag eels mmp2 (mmp2) marker DOI:10.1016/j.neuron.2020.09.023
    GSE176129 (pdgfrb-positive) Danio rerio whole body 16 Chondrocytes baseline 5dpf, FACS-isolated pdgfrb-positive cells ENSDARG00000052437 (mia) marker DOI:10.7554/eLife.44431
    GSE158099 (WT) Danio rerio whole body 3 Chondrocytes baseline 2.5dpf, cd41:GFPlow-WT ENSDARG00000073699 (col9a1a) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 Chondrocytes hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- ENSDARG00000073699 (col9a1a) marker DOI:10.1182/bloodadvances.2020003969

        After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.