CELL TYPE: Endothelium


Distribution of Endothelium in Tissues/Organs

Word Cloud of All Markers


Function



  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Endothelium.


  • Detail Marker Information in Datasets


    Dataset ID Species Tissue / Organ Cell cluster Cell type Experiment type Sample Marker gene Marker class Evidence
    PRJNA554650 (6.5dpf) Danio rerio brain 15 Endothelium baseline 6.5dpf, whole brain of nr1d1:VNP fish ENSDARG00000104068 (gstp1) marker DOI:10.1038/nbt.4103
    PRJNA554650 (6.5dpf) Danio rerio brain 17 Endothelium baseline 6.5dpf, whole brain of nr1d1:VNP fish ENSDARG00000104068 (gstp1) marker DOI:10.1038/nbt.4103
    PRJNA415636 (brain) Danio rerio brain 9 Endothelium baseline adult, Zebrabow M, brain ENSDARG00000102100 (mrc1a) marker DOI:10.1038/nbt.4124
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 5 Endothelium baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000054632 (fli1a) marker DOI:10.1038/srep44644
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 11 Endothelium baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000054632 (fli1a) marker DOI:10.1038/srep44644
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 5 Endothelium baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000054632 (fli1a) marker DOI:10.1038/srep44644
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 11 Endothelium baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000054632 (fli1a) marker DOI:10.1038/srep44644
    GSE144944 (fgfr3 +|+) Danio rerio cranial vault 21 Endothelium baseline 1mpf, fgfr3 +/+ ENSDARG00000054632 (fli1a) marker DOI:10.1016/j.ydbio.2006.08.020
    GSE144944 (fgfr3 +|+) Danio rerio cranial vault 21 Endothelium baseline 1mpf, fgfr3 +/+ ENSDARG00000105215 (kdrl) marker DOI:10.1016/j.ydbio.2006.08.020
    GSE144944 (fgfr3 +|+) Danio rerio cranial vault 21 Endothelium baseline 1mpf, fgfr3 +/+ ENSDARG00000004105 (tie1) marker DOI:10.1016/j.ydbio.2006.08.020
    GSE144944 (fgfr3 +|+) Danio rerio cranial vault 21 Endothelium baseline 1mpf, fgfr3 +/+ ENSDARG00000077039 (esama) marker DOI:10.1016/j.ydbio.2006.08.020
    GSE173972 (WT, ezh1+|+) Danio rerio embryo 3 Endothelium baseline 1.25dpf, Kdrl-positive embryos ENSDARG00000060263 (pecam1) marker DOI:10.1016/j.stemcr.2021.05.014
    GSE173972 (WT, ezh1+|+) Danio rerio embryo 8 Endothelium baseline 1.25dpf, Kdrl-positive embryos ENSDARG00000060263 (pecam1) marker DOI:10.1016/j.stemcr.2021.05.014
    GSE173972 (HET, ezh1+|-) Danio rerio embryo 3 Endothelium hematopoietic 1.25dpf, Kdrl-positive embryos ENSDARG00000060263 (pecam1) marker DOI:10.1016/j.stemcr.2021.05.014
    GSE173972 (HET, ezh1+|-) Danio rerio embryo 10 Endothelium hematopoietic 1.25dpf, Kdrl-positive embryos ENSDARG00000092170 (apoc1) marker DOI:10.1016/j.stemcr.2021.05.014
    GSE173972 (KO, ezh1-|-) Danio rerio embryo 3 Endothelium hematopoietic 1.25dpf, Kdrl-positive embryos ENSDARG00000060263 (pecam1) marker DOI:10.1016/j.stemcr.2021.05.014
    GSE173972 (KO, ezh1-|-) Danio rerio embryo 5 Endothelium hematopoietic 1.25dpf, Kdrl-positive embryos ENSDARG00000060263 (pecam1) marker DOI:10.1016/j.stemcr.2021.05.014
    GSE126647 (control) Danio rerio embryo 8 Endothelium baseline 1.17dpf, control nkx2.5:ZsYellow+ cells ENSDARG00000103533 (clec14a) marker DOI:10.1242/dev.185652
    GSE126647 (Pbx4-depleted) Danio rerio embryo 6 Endothelium growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells ENSDARG00000103533 (clec14a) marker DOI:10.1242/dev.185652
    PRJNA706197 (20hpf) Danio rerio embryo 5 Endothelium baseline 20hpf, FACS sorted sox10:nEOS cells ENSDARG00000000767 (spi1b) marker DOI:10.1016/j.celrep.2021.110140
    PRJNA706197 (18hpf) Danio rerio embryo 3 Endothelium baseline 18hpf, FACS sorted sox10:nEOS cells ENSDARG00000000767 (spi1b) marker DOI:10.1016/j.celrep.2021.110140
    PRJNA706197 (18hpf) Danio rerio embryo 6 Endothelium baseline 18hpf, FACS sorted sox10:nEOS cells ENSDARG00000105215 (kdrl) marker DOI:10.1016/j.celrep.2021.110140
    PRJNA564810 (5dpf) Danio rerio embryo 21 Endothelium baseline 5dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000105215 (kdrl) marker DOI:10.1093/g3journal/jkac062
    PRJNA564810 (5dpf) Danio rerio embryo 21 Endothelium baseline 5dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000060263 (pecam1) marker DOI:10.1093/g3journal/jkac062
    PRJNA564810 (5dpf) Danio rerio embryo 21 Endothelium baseline 5dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000030125 (sox7) marker DOI:10.1093/g3journal/jkac062
    PRJNA564810 (5dpf) Danio rerio embryo 21 Endothelium baseline 5dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000103533 (clec14a) marker DOI:10.1093/g3journal/jkac062
    PRJNA564810 (5dpf) Danio rerio embryo 21 Endothelium baseline 5dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000036616 (gpr182) marker DOI:10.1093/g3journal/jkac062
    PRJNA564810 (2dpf) Danio rerio embryo 26 Endothelium baseline 2dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000060263 (pecam1) marker DOI:10.1093/g3journal/jkac062
    PRJNA564810 (1dpf) Danio rerio embryo 16 Endothelium baseline 1dpf, a single-cell transcriptome atlas for zebrafish development ENSDARG00000060263 (pecam1) marker DOI:10.1093/g3journal/jkac062
    PRJNA797645 Gasterosteus aculeatus embryo 23 Endothelium baseline 70 hpf, whole embryo, untreatment ENSGACG00000013350 (pecam1) marker DOI:10.1016/j.stemcr.2021.05.014
    PRJNA797645 Gasterosteus aculeatus embryo 23 Endothelium baseline 70 hpf, whole embryo, untreatment ENSGACG00000010806 (sox7) marker DOI:10.1016/j.stemcr.2021.05.014
    PRJNA415636 (pancreas, liver) Danio rerio hepatopancreas 11 Endothelium baseline adult, Zebrabow M, pancreas and liver ENSDARG00000045141 (aqp8a.1) marker DOI:10.1038/nbt.4124
    PRJNA754013 (zebrafish) Danio rerio hypothalamus 9 Endothelium baseline adult, male, female, untreatment ENSDARG00000035810 (rgcc) marker DOI:10.1038/s41559-021-01580-3
    GSE150498 (untreated ctrl) Danio rerio intestine 10 Endothelium baseline 6dpf, untreated ctrl ENSDARG00000105215 (kdrl) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (DSS treated) Danio rerio intestine 7 Endothelium disease 6dpf, DSS treated ENSDARG00000105215 (kdrl) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, untreated) Danio rerio intestine 10 Endothelium disease 6dpf, nod2-/-, untreated ENSDARG00000014059 (cldn5b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 1X DSS) Danio rerio intestine 14 Endothelium disease 6dpf, wildtype, 1X DSS ENSDARG00000060263 (pecam1) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 1X DSS) Danio rerio intestine 14 Endothelium disease 6dpf, nod2-/-, 1X DSS ENSDARG00000105215 (kdrl) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS) Danio rerio intestine 12 Endothelium disease 6dpf, nod2-/-, 2X DSS ENSDARG00000105215 (kdrl) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS) Danio rerio intestine 12 Endothelium disease 6dpf, nod2-/-, 2X DSS ENSDARG00000014059 (cldn5b) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS+BZA) Danio rerio intestine 11 Endothelium disease 6dpf, nod2-/-, 2X DSS+BZA ENSDARG00000105215 (kdrl) marker DOI:10.1038/s41586-021-03484-5
    GSE137784 (HCC, CreLox) Danio rerio liver 6 Endothelium disease 6mpf, male, isolated from the zebrafish without HCC ENSDARG00000037870 (actb2) marker DOI:10.1242/bio.047829
    GSE137784 (HCC, CreLox) Danio rerio liver 7 Endothelium disease 6mpf, male, isolated from the zebrafish without HCC ENSDARG00000058358 (krt8) marker DOI:10.1242/bio.047829
    GSE137784 (no HCC) Danio rerio liver 3 Endothelium baseline 6mpf, male, isolated from the CreLox zebrafish with HCC ENSDARG00000014646 (aoc2) marker DOI:10.1242/bio.047829
    PRJNA668529 (3d) Danio rerio olfactory rosette 7 Endothelium disease 3mpf, intranasal 100ng r-Spike 3 days ENSDARG00000030125 (sox7) marker DOI:10.3389/fcvm.2019.00030, DOI:10.1016/j.bbi.2022.03.006
    PRJNA668529 (3h) Danio rerio olfactory rosette 3 Endothelium disease 3mpf, intranasal 100ng r-Spike 3 hours ENSDARG00000030125 (sox7) marker DOI:10.1016/j.bbi.2022.03.006
    PRJNA668529 (3h) Danio rerio olfactory rosette 7 Endothelium disease 3mpf, intranasal 100ng r-Spike 3 hours ENSDARG00000030125 (sox7) marker DOI:10.3389/fcvm.2019.00030, DOI:10.1016/j.bbi.2022.03.006
    PRJNA668529 (control) Danio rerio olfactory rosette 4 Endothelium baseline 3mpf, intranasal PBS ENSDARG00000058358 (krt8) marker DOI:10.1016/j.bbi.2022.03.006
    PRJNA668529 (control) Danio rerio olfactory rosette 7 Endothelium baseline 3mpf, intranasal PBS ENSDARG00000030125 (sox7) marker DOI:10.3389/fcvm.2019.00030, DOI:10.1016/j.bbi.2022.03.006
    GSE175406 Mastacembelus armatus ovotestes 6 Endothelium baseline The ovotestes of three individual 2-year-old zig-zag eels kdr (kdr) marker DOI:10.15252/embr.202050612
    GSE148591 (3mpf) Danio rerio pituitary 13 Endothelium transplant 3mpf, graft transplantation during early embryogenesis ENSDARG00000054632 (fli1a) marker DOI:10.1126/science.aba4767
    GSE148591 (3mpf) Danio rerio pituitary 13 Endothelium transplant 3mpf, graft transplantation during early embryogenesis ENSDARG00000105215 (kdrl) marker DOI:10.1126/science.aba4767
    GSE148591 (3mpf) Danio rerio pituitary 13 Endothelium transplant 3mpf, graft transplantation during early embryogenesis ENSDARG00000076972 (plvapa) marker DOI:10.1126/science.aba4767
    PRJNA415636 (primary pancreatic islet) Danio rerio primary pancreatic islet 6 Endothelium baseline adult, Zebrabow M, primary pancreatic islet ENSDARG00000045141 (aqp8a.1) marker DOI:10.1038/nbt.4124
    PRJNA415636 (primary pancreatic islet) Danio rerio primary pancreatic islet 6 Endothelium baseline adult, Zebrabow M, primary pancreatic islet ENSDARG00000019371 (flt1) marker DOI:10.1038/nbt.4124
    PRJNA551501 (2mpf) Danio rerio thyroid gland 8 Endothelium baseline 2mpf, Tg(tg:mVenus-T2A-NTR) ENSDARG00000036616 (gpr182) marker DOI:10.15252/embr.202050612
    PRJNA551501 (2mpf) Danio rerio thyroid gland 12 Endothelium baseline 2mpf, Tg(tg:mVenus-T2A-NTR) ENSDARG00000036616 (gpr182) marker DOI:10.15252/embr.202050612
    PRJNA551501 (8mpf) Danio rerio thyroid gland 7 Endothelium baseline 8mpf, Tg(tg:mVenus-T2A-NTR) ENSDARG00000036616 (gpr182) marker DOI:10.15252/embr.202050612

        After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.