CELL TYPE: HSPCs


Distribution of HSPCs in Tissues/Organs

Word Cloud of All Markers


Function



  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of HSPCs.


  • Detail Marker Information in Datasets


    Dataset ID Species Tissue / Organ Cell cluster Cell type Experiment type Sample Marker gene Marker class Evidence
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 2 HSPCs baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000004392 (hdr) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 2 HSPCs baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000019930 (tal1) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 2 HSPCs baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000078004 (drl) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 3 HSPCs baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000004392 (hdr) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 3 HSPCs baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000019930 (tal1) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 3 HSPCs baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000078004 (drl) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 1 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000004392 (hdr) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 1 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000019930 (tal1) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 1 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000078004 (drl) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 2 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000004392 (hdr) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 2 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000019930 (tal1) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 2 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000078004 (drl) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 8 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000004392 (hdr) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 8 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000019930 (tal1) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 8 HSPCs baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000078004 (drl) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA605021 (supporting cells) Danio rerio neuromast 12 HSPCs baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae ENSDARG00000004392 (hdr) marker DOI:10.1016/j.cub.2020.01.027
    PRJNA605021 (supporting cells) Danio rerio neuromast 12 HSPCs baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae ENSDARG00000019930 (tal1) marker DOI:10.1016/j.cub.2020.01.027
    GSE158099 (WT) Danio rerio whole body 2 HSPCs baseline 2.5dpf, cd41:GFPlow-WT ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 2 HSPCs baseline 2.5dpf, cd41:GFPlow-WT ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 2 HSPCs baseline 2.5dpf, cd41:GFPlow-WT ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 8 HSPCs baseline 2.5dpf, cd41:GFPlow-WT ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 8 HSPCs baseline 2.5dpf, cd41:GFPlow-WT ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 8 HSPCs baseline 2.5dpf, cd41:GFPlow-WT ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 5 HSPCs hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 1 HSPCs baseline 6dpf, cd41:GFPlow-WT ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 1 HSPCs baseline 6dpf, cd41:GFPlow-WT ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 1 HSPCs baseline 6dpf, cd41:GFPlow-WT ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 5 HSPCs baseline 6dpf, cd41:GFPlow-WT ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 5 HSPCs baseline 6dpf, cd41:GFPlow-WT ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 5 HSPCs baseline 6dpf, cd41:GFPlow-WT ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 1 HSPCs hematopoietic 6dpf, cd41:GFPlow-runx1-/- ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 HSPCs hematopoietic 6dpf, cd41:GFPlow-runx1-/- ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 2 HSPCs baseline 10dpf, cd41:GFPlow-WT ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 2 HSPCs baseline 10dpf, cd41:GFPlow-WT ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 2 HSPCs baseline 10dpf, cd41:GFPlow-WT ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 5 HSPCs baseline 10dpf, cd41:GFPlow-WT ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 5 HSPCs baseline 10dpf, cd41:GFPlow-WT ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 5 HSPCs baseline 10dpf, cd41:GFPlow-WT ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 6 HSPCs hematopoietic 10dpf, cd41:GFPlow-runx1-/- ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 6 HSPCs hematopoietic 10dpf, cd41:GFPlow-runx1-/- ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 6 HSPCs hematopoietic 10dpf, cd41:GFPlow-runx1-/- ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 1 HSPCs baseline 16dpf, cd41:GFPlow-WT ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 1 HSPCs baseline 16dpf, cd41:GFPlow-WT ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) Danio rerio whole body 1 HSPCs baseline 16dpf, cd41:GFPlow-WT ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000077504 (si:ch211-103n10.5) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 5 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000077504 (si:ch211-103n10.5) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 1 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 1 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 1 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 2 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 5 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000043126 (blf) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 5 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000004392 (hdr) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 5 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000019930 (tal1) marker DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) Danio rerio whole body 8 HSPCs hematopoietic 16dpf, cd41:GFPlow-runx1-/- ENSDARG00000034852 (nt5c2l1) marker DOI:10.1182/bloodadvances.2020003969

        After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.