Fish Single-cell RNA Database

CELL TYPE: Green cone opsin

Distribution of Green cone opsin in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000003512	anks1b	4: 17886838 ~ 18202291 (-)
ENSDARG00000074905	camk1da	4: 7888047 ~ 7983016 (+)
ENSDARG00000101135	si:dkey-85k7.7	7: 21859337 ~ 21874346 (+)
ENSDARG00000043010	camk2d1	7: 57725708 ~ 57880131 (+)
ENSDARG00000045139	ca7	7: 44802353 ~ 44813763 (+)
ENSDARG00000052244	zgc:158564	7: 39664055 ~ 39678530 (+)
ENSDARG00000013317	pygmb	7: 22823889 ~ 22852189 (+)
ENSDARG00000070107	six7	7: 7401692 ~ 7420301 (-)
ENSDARG00000059815	oaz2b	7: 48288762 ~ 48296227 (+)
ENSDARG00000091348	rtn3	7: 17716601 ~ 17757529 (+)
ENSDARG00000015536	sox6	7: 27250012 ~ 27454645 (+)
ENSDARG00000074319	sall1a	7: 37359004 ~ 37392172 (+)
ENSDARG00000105529	vgf	7: 26224211 ~ 26230166 (+)
ENSDARG00000035630	ypel1	5: 13037106 ~ 13086616 (-)
ENSDARG00000060978	atp2a3	5: 31168096 ~ 31269354 (+)
ENSDARG00000038524	pik3r1	5: 54765702 ~ 54792239 (-)
ENSDARG00000054288	zgc:63972	5: 33940215 ~ 33959868 (-)
ENSDARG00000078270	CU467961.1	5: 54945021 ~ 55114917 (-)
ENSDARG00000056036	stxbp1b	5: 28972935 ~ 29002322 (+)
ENSDARG00000026820	gucy2d	5: 38123633 ~ 38161033 (-)
ENSDARG00000074120	usp2b	5: 63088740 ~ 63109232 (-)
ENSDARG00000077298	gas1a	5: 44455754 ~ 44496805 (-)
ENSDARG00000103743	si:dkeyp-72e1.9	3: 36515376 ~ 36586979 (+)
ENSDARG00000073998	si:ch211-23l10.3	3: 16473006 ~ 16493528 (-)
ENSDARG00000020847	atp6v0a1a	3: 16922226 ~ 16973125 (+)
ENSDARG00000054320	ap2a1	3: 32365811 ~ 32401481 (+)
ENSDARG00000003486	ppp1caa	3: 30888126 ~ 30909487 (-)
ENSDARG00000060915	fbxl16	3: 28634467 ~ 28665291 (-)
ENSDARG00000076118	cdip1	3: 46387860 ~ 46410387 (-)
ENSDARG00000079688	tnrc6a	3: 35495570 ~ 35533366 (+)
ENSDARG00000079802	aanat2	3: 54887782 ~ 54893706 (+)
ENSDARG00000035952	cdr2a	3: 58430678 ~ 58455289 (-)
ENSDARG00000056467	tmub2	3: 20012891 ~ 20021596 (+)
ENSDARG00000059574	fscn2a	3: 57234093 ~ 57257075 (+)
ENSDARG00000070567	cadpsb	6: 41255485 ~ 41446053 (+)
ENSDARG00000074979	larp4ab	6: 39633065 ~ 39653972 (-)
ENSDARG00000070951	hmga1b	6: 54142311 ~ 54152983 (+)
ENSDARG00000014770	usp4	6: 42345005 ~ 42369186 (-)
ENSDARG00000020625	jak1	6: 31368071 ~ 31429161 (+)
ENSDARG00000023771	gabrb3	6: 38381957 ~ 38513578 (+)
ENSDARG00000097008	opn1mw1	6: 41181869 ~ 41183823 (+)
ENSDARG00000044280	opn1mw2	6: 41186320 ~ 41189460 (+)
ENSDARG00000015531	slc4a8	6: 40354424 ~ 40405934 (+)
ENSDARG00000097572	ptprt	6: 51009981 ~ 51101834 (-)
ENSDARG00000102558	pde6ha	6: 344423 ~ 346084 (-)
ENSDARG00000007663	amph	2: 31891335 ~ 31937005 (-)
ENSDARG00000035859	angptl4	2: 24536762 ~ 24542518 (+)
ENSDARG00000032465	slc1a8b	2: 37110504 ~ 37122351 (+)
ENSDARG00000003068	gorasp1a	2: 23808640 ~ 23820280 (+)
ENSDARG00000031658	si:ch211-207d6.2	2: 29795833 ~ 29896572 (+)
ENSDARG00000100494	pbx1a	2: 18698388 ~ 18830794 (-)
ENSDARG00000088073	fam110b	2: 22208404 ~ 22286828 (-)
ENSDARG00000084045	CABZ01044731.1	2: 48746683 ~ 48746812 (-)
ENSDARG00000058231	nt5c2b	1: 31809173 ~ 31856676 (-)
ENSDARG00000101597	si:dkeyp-57d7.4	1: 9230244 ~ 9231952 (-)
ENSDARG00000094677	si:dkey-92j12.5	1: 23161369 ~ 23240046 (+)
ENSDARG00000060148	sh3pxd2aa	1: 47585700 ~ 47686888 (+)
ENSDARG00000105060	rdh8b	1: 59293873 ~ 59303460 (+)
ENSDARG00000034093	dclk2a	1: 37195465 ~ 37310490 (+)
ENSDARG00000037487	march1	1: 19708508 ~ 19756359 (+)
ENSDARG00000008068	tma16	1: 19759370 ~ 19764038 (-)
ENSDARG00000078057	snx8b	1: 11881559 ~ 11900420 (+)
ENSDARG00000093886	tmsb5	1: 18810891 ~ 18811517 (-)
ENSDARG00000056806	pde5aa	1: 14257158 ~ 14258409 (-)
ENSDARG00000030012	lrrfip1a	9: 24065855 ~ 24115589 (+)
ENSDARG00000062696	dgkg	9: 22375331 ~ 22618558 (+)
ENSDARG00000040705	glsb	9: 41273231 ~ 41351426 (-)
ENSDARG00000019782	impg2a	9: 30188764 ~ 30190513 (-)
ENSDARG00000056617	rpgra	9: 30274637 ~ 30288446 (+)
ENSDARG00000055052	map2	9: 38883388 ~ 38993033 (+)
ENSDARG00000067676	plcl1	9: 32358514 ~ 32457334 (+)
ENSDARG00000014333	ormdl1	9: 41024973 ~ 41034174 (+)
ENSDARG00000103823	rbms1b	9: 51655636 ~ 51755758 (+)
ENSDARG00000041382	si:dkey-283b15.2	16: 5650495 ~ 5671862 (-)
ENSDARG00000095831	si:ch211-175f12.2	16: 4010967 ~ 4031386 (-)
ENSDARG00000035308	grb10b	16: 8364085 ~ 8520474 (-)
ENSDARG00000061904	fhod3b	16: 18608978 ~ 18960613 (-)
ENSDARG00000098135	stk40	16: 36038130 ~ 36064143 (-)
ENSDARG00000019383	cdc42bpb	20: 18391860 ~ 18536474 (-)
ENSDARG00000032838	si:dkey-206f10.1	20: 43602810 ~ 43644531 (+)
ENSDARG00000088377	rp1l1b	20: 19119800 ~ 19148677 (+)
ENSDARG00000069101	napbb	20: 45643823 ~ 45661053 (-)
ENSDARG00000034293	hif1ab	20: 20326611 ~ 20355577 (-)
ENSDARG00000042904	foxo3b	20: 32286765 ~ 32332736 (-)
ENSDARG00000077187	impg1a	20: 778608 ~ 805245 (-)
ENSDARG00000009142	ppp1r13bb	20: 20731052 ~ 20814177 (+)
ENSDARG00000079687	rnf10	8: 41256612 ~ 41273768 (-)
ENSDARG00000011855	aak1a	8: 48965767 ~ 49044259 (+)
ENSDARG00000056252	sort1b	8: 25041713 ~ 25074319 (-)
ENSDARG00000010572	slc25a25a	8: 2606068 ~ 2616326 (-)
ENSDARG00000059960	plch2a	8: 47342586 ~ 47622532 (+)
ENSDARG00000011122	pptc7a	8: 4368534 ~ 4402181 (+)
ENSDARG00000077367	ntng2a	8: 11993150 ~ 12111461 (+)
ENSDARG00000001686	uckl1a	8: 23009662 ~ 23028536 (+)
ENSDARG00000074839	impg1b	17: 36627099 ~ 36681740 (+)
ENSDARG00000071004	abhd12	17: 21154576 ~ 21200406 (-)
ENSDARG00000032932	cnksr1	17: 26990531 ~ 27048640 (-)
ENSDARG00000006272	mpp5a	17: 34186632 ~ 34239514 (+)
ENSDARG00000088168	ablim3	14: 34634145 ~ 34771864 (-)
ENSDARG00000055792	foxo4	14: 30910114 ~ 30917928 (+)
ENSDARG00000075058	gabra6a	14: 22152060 ~ 22168786 (+)
ENSDARG00000071697	zgc:66433	14: 20918701 ~ 21001756 (+)
ENSDARG00000004402	elovl6	14: 36231126 ~ 36268710 (+)
ENSDARG00000037488	canx	14: 16432738 ~ 16476863 (-)
ENSDARG00000039093	got1	13: 40437550 ~ 40456995 (+)
ENSDARG00000062489	march8	13: 17751866 ~ 18011208 (-)
ENSDARG00000010934	syt14a	13: 31844011 ~ 31888487 (-)
ENSDARG00000075570	ide	13: 42309688 ~ 42350160 (+)
ENSDARG00000039486	bag3	13: 25486608 ~ 25498661 (+)
ENSDARG00000076135	mmrn2a	13: 22619684 ~ 22646134 (-)
ENSDARG00000061413	sec23ip	13: 25549425 ~ 25566308 (+)
ENSDARG00000078102	psda	13: 22740038 ~ 22774491 (-)
ENSDARG00000087911	psme4a	13: 35689749 ~ 35744963 (+)
ENSDARG00000056978	letm1	13: 13033424 ~ 13099800 (+)
ENSDARG00000056080	si:dkey-191g9.5	13: 21712284 ~ 21739142 (-)
ENSDARG00000079249	ogdhl	13: 29352842 ~ 29406695 (+)
ENSDARG00000062350	synm	18: 20859661 ~ 20869175 (-)
ENSDARG00000041068	got2a	18: 21178721 ~ 21188768 (-)
ENSDARG00000038121	si:ch211-13k12.2	18: 25563292 ~ 25646286 (-)
ENSDARG00000017429	sphkap	18: 46395909 ~ 46464501 (-)
ENSDARG00000035273	tmtc2b	18: 11858397 ~ 11909472 (+)
ENSDARG00000040274	scamp5b	18: 50089000 ~ 50100149 (+)
ENSDARG00000100397	pde6c	12: 5129245 ~ 5154099 (+)
ENSDARG00000026482	arhgap12b	12: 26621906 ~ 26726048 (+)
ENSDARG00000007294	aco2	12: 19106571 ~ 19119176 (-)
ENSDARG00000045164	nptx2b	12: 17889465 ~ 17897134 (-)
ENSDARG00000078425	oat	12: 46960579 ~ 47042081 (+)
ENSDARG00000098983	CABZ01112656.1	12: 49003489 ~ 49032899 (-)
ENSDARG00000056605	wbp2	12: 45200744 ~ 45218478 (+)
ENSDARG00000098845	lrp12	19: 13375838 ~ 13397295 (+)
ENSDARG00000033804	snx27a	19: 8612839 ~ 8647894 (+)
ENSDARG00000103658	hivep1	19: 3383025 ~ 3488860 (-)
ENSDARG00000062995	si:dkey-14o18.2	19: 9732084 ~ 9786914 (-)
ENSDARG00000054797	zgc:153441	19: 42418227 ~ 42424599 (-)
ENSDARG00000061687	atxn1a	19: 32257472 ~ 32461596 (+)
ENSDARG00000002748	sema6d	19: 390298 ~ 417381 (+)
ENSDARG00000028533	macf1a	19: 35039902 ~ 35340027 (-)
ENSDARG00000061804	si:ch211-194e15.5	19: 30897255 ~ 30904590 (-)
ENSDARG00000099555	foxo1a	15: 3284416 ~ 3379041 (+)
ENSDARG00000013921	frya	15: 31806303 ~ 31910235 (+)
ENSDARG00000034453	unc119a	15: 28106498 ~ 28125224 (+)
ENSDARG00000028793	nlk2	15: 30157602 ~ 30301528 (+)
ENSDARG00000090716	cltcb	15: 17285989 ~ 17340198 (+)
ENSDARG00000061895	usp32	15: 23816945 ~ 23908779 (-)
ENSDARG00000078748	si:ch211-137a8.4	15: 29085955 ~ 29091807 (+)
ENSDARG00000079502	gal3st2	15: 40271177 ~ 40286196 (+)
ENSDARG00000077236	hspb6	15: 37559570 ~ 37562582 (+)
ENSDARG00000103364	cs	23: 33907899 ~ 33928316 (+)
ENSDARG00000015343	pgd	23: 29381441 ~ 29394505 (-)
ENSDARG00000089063	lactbl1a	23: 21964325 ~ 21974831 (+)
ENSDARG00000009899	znf385a	23: 28185883 ~ 28294763 (-)
ENSDARG00000004836	dnajc5ab	23: 17472702 ~ 17509656 (-)
ENSDARG00000026907	slc48a1a	23: 33357163 ~ 33361425 (-)
ENSDARG00000016570	prlra	21: 11105007 ~ 11135942 (+)
ENSDARG00000019208	camsap1a	21: 4712134 ~ 4764124 (-)
ENSDARG00000023536	nnt	21: 19763546 ~ 19828423 (-)
ENSDARG00000055132	lrfn4a	21: 26908627 ~ 26918903 (-)
ENSDARG00000060106	crb2a	21: 8478774 ~ 8513192 (-)
ENSDARG00000020645	slc7a3a	21: 30502002 ~ 30537411 (+)
ENSDARG00000061794	jam3b	21: 24984970 ~ 25046991 (+)
ENSDARG00000104480	hcn1	21: 10253976 ~ 10488379 (-)
ENSDARG00000098304	taok1b	21: 40528788 ~ 40579807 (-)
ENSDARG00000030239	dennd6aa	11: 42422371 ~ 42459902 (+)
ENSDARG00000025902	plekhg5a	11: 24464356 ~ 24538860 (-)
ENSDARG00000070229	zgc:158258	11: 37683278 ~ 37693019 (-)
ENSDARG00000013016	pole4	11: 6197276 ~ 6206625 (-)
ENSDARG00000055373	sema3fb	11: 35447417 ~ 35575830 (-)
ENSDARG00000079849	nrtn	11: 6349443 ~ 6386572 (-)
ENSDARG00000018146	gpx1a	11: 36048579 ~ 36156971 (-)
ENSDARG00000029474	camk1b	11: 4026229 ~ 4132662 (+)
ENSDARG00000020328	plekha6	11: 23342996 ~ 23501467 (-)
ENSDARG00000087349	reep6	11: 7261981 ~ 7274378 (+)
ENSDARG00000102430	opn6a	11: 44858979 ~ 44876005 (-)
ENSDARG00000026499	ppm1e	10: 32683089 ~ 32788832 (+)
ENSDARG00000078691	gigyf1b	10: 22510280 ~ 22533793 (+)
ENSDARG00000025011	synj1	10: 26515946 ~ 26569350 (+)
ENSDARG00000056511	arr3a	10: 26800213 ~ 26811397 (+)
ENSDARG00000036028	arrdc3b	10: 43761480 ~ 43771447 (-)
ENSDARG00000021455	strbp	10: 9834896 ~ 10018794 (-)
ENSDARG00000010641	slc20a1b	10: 17713022 ~ 17728165 (+)
ENSDARG00000104094	grk3	10: 44057177 ~ 44198211 (+)
ENSDARG00000100876	sez6a	10: 36828069 ~ 36927594 (-)
ENSDARG00000010023	CU856539.1	10: 2499383 ~ 2527342 (-)
ENSDARG00000099943	mapre2	24: 35679797 ~ 35707552 (-)
ENSDARG00000062058	slc12a7b	24: 39778648 ~ 39885785 (-)
ENSDARG00000010186	myo3a	24: 6161037 ~ 6260333 (-)
ENSDARG00000104295	arhgap21a	24: 6513843 ~ 6647275 (-)
ENSDARG00000073744	ip6k1	22: 39054012 ~ 39083156 (+)
ENSDARG00000071377	hsd11b1la	22: 19552987 ~ 19562455 (+)
ENSDARG00000041609	adarb1a	22: 12641580 ~ 12693837 (-)
ENSDARG00000006192	gatad2ab	22: 18315490 ~ 18387919 (+)
ENSDARG00000100506	crb1	22: 23493170 ~ 23545828 (-)
ENSDARG00000018524	midn	22: 18725101 ~ 18749313 (-)
ENSDARG00000099757	wdr47b	22: 24559947 ~ 24591645 (+)
ENSDARG00000070717	slc25a18	25: 16615178 ~ 16666886 (-)
ENSDARG00000099265	slc7a5	25: 12750340 ~ 12788370 (-)
ENSDARG00000063895	mt-nd1	MT: 3803 ~ 4777 (+)
ENSDARG00000063899	mt-nd2	MT: 4993 ~ 6039 (+)
ENSDARG00000063905	mt-co1	MT: 6425 ~ 7975 (+)
ENSDARG00000063908	mt-co2	MT: 8130 ~ 8820 (+)
ENSDARG00000063911	mt-atp6	MT: 9052 ~ 9735 (+)
ENSDARG00000063916	mt-nd4l	MT: 11009 ~ 11305 (+)
ENSDARG00000063921	mt-nd5	MT: 12897 ~ 14717 (+)
ENSDARG00000063922	mt-nd6	MT: 14714 ~ 15232 (-)
ENSDARG00000063924	mt-cyb	MT: 15308 ~ 16448 (+)
--	fam124a	--
--	map3k13	--
--	si:ch211-221f10.2	--
--	frmpd1	--
--	si:ch211-161c3.5	--
--	xloc-027892	--
--	xloc-040108	--
--	zgc:112356	--
--	mstrg.13338	--
--	mstrg.14516	--
--	mstrg.1529	--
--	mstrg.22405	--
--	mstrg.22585	--
--	mstrg.8082	--
--	xloc-042788	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Green cone opsin.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE175929 (5mpf)	Danio rerio	retina	8	Green cone opsin	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	ENSDARG00000097008 (opn1mw1)	marker	DOI:10.1038/s41598-021-96837-z
	GSE175929 (5mpf)	Danio rerio	retina	8	Green cone opsin	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	ENSDARG00000044280 (opn1mw2)	marker	DOI:10.1038/s41598-021-96837-z

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Green cone opsin

Distribution of Green cone opsin in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences