DATASET ID: PRJNA766837

Basic information

Tissue / Organ anterior kidney
Experiment type baseline
Sample male, adult, untreatment
Source dataset ID SRR16095434
Project ID PRJNA766837
Species Oreochromis niloticus

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Granulocyte lcp1 (lcp1) protein_coding marker doi:10.3389/fimmu.2021.783196
    1 Granulocyte nccrp1 (nccrp1) protein_coding marker doi:10.3389/fimmu.2021.783196
    1 Granulocyte fcer1g (fcer1g) protein_coding marker doi:10.3389/fimmu.2021.783196
    2 B cells pax5 (pax5) protein_coding marker doi:10.3389/fimmu.2021.783196
    2 B cells cd79a (cd79a) protein_coding marker doi:10.3389/fimmu.2021.783196
    2 B cells cd79b (cd79b) protein_coding marker doi:10.3389/fimmu.2021.783196
    3 Granulocyte fcer1g (fcer1g) protein_coding marker doi:10.3389/fimmu.2021.783196
    4 T cells cd3e (cd3e) protein_coding marker doi:10.3389/fimmu.2021.783196
    4 T cells tcf7 (tcf7) protein_coding marker doi:10.3389/fimmu.2021.783196
    6 T cells cd3e (cd3e) protein_coding marker doi:10.3389/fimmu.2021.783196
    6 T cells tcf7 (tcf7) protein_coding marker doi:10.3389/fimmu.2021.783196
    7 Macrophage marco (marco) protein_coding marker doi:10.3389/fimmu.2021.783196
    8 Granulocyte lcp1 (lcp1) protein_coding marker doi:10.3389/fimmu.2021.783196
    8 Granulocyte nccrp1 (nccrp1) protein_coding marker doi:10.3389/fimmu.2021.783196
    8 Granulocyte fcer1g (fcer1g) protein_coding marker doi:10.3389/fimmu.2021.783196
    9 T cells cd3e (cd3e) protein_coding marker doi:10.3389/fimmu.2021.783196
    9 T cells tcf7 (tcf7) protein_coding marker doi:10.3389/fimmu.2021.783196
    10 B cells pax5 (pax5) protein_coding marker doi:10.3389/fimmu.2021.783196
    10 B cells cd79a (cd79a) protein_coding marker doi:10.3389/fimmu.2021.783196
    12 T cells cd3e (cd3e) protein_coding marker doi:10.3389/fimmu.2021.783196
    12 T cells tcf7 (tcf7) protein_coding marker doi:10.3389/fimmu.2021.783196
    14 B cells pax5 (pax5) protein_coding marker doi:10.3389/fimmu.2021.783196
    14 B cells cd79a (cd79a) protein_coding marker doi:10.3389/fimmu.2021.783196
    14 B cells cd79b (cd79b) protein_coding marker doi:10.3389/fimmu.2021.783196
    15 B cells pax5 (pax5) protein_coding marker doi:10.3389/fimmu.2021.783196
    15 B cells cd79a (cd79a) protein_coding marker doi:10.3389/fimmu.2021.783196
    15 B cells cd79b (cd79b) protein_coding marker doi:10.3389/fimmu.2021.783196
    16 Granulocyte fcer1g (fcer1g) protein_coding marker doi:10.3389/fimmu.2021.783196
    16 Granulocyte nccrp1 (nccrp1) protein_coding marker doi:10.3389/fimmu.2021.783196
    17 Macrophage creg1 (creg1) protein_coding marker doi:10.3389/fimmu.2021.783196

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)