DATASET ID: GSE153961 (intersex)

Basic information

Tissue / Organ gonad
Experiment type baseline
Sample adult, untreatment
Source dataset ID GSM4661001
Project ID GSE153961
Species Monopterus albus

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Early round spermatids spag6 (spag6) protein_coding marker DOI:10.1038/s41419-021-03676-x
    2 Zygotene primary spermatocytes meiob (meiob) protein_coding marker DOI:10.1038/s41419-021-03676-x
    3 Pachytene primary spermatocytes sycp2 (sycp2) protein_coding marker DOI:10.1038/s41419-021-03676-x
    4 Spermatogonia B cdca3 (cdca3) protein_coding marker DOI:10.1038/s41419-021-03676-x
    4 Spermatogonia B kmt5a (kmt5a) protein_coding marker DOI:10.1016/j.ejcb.2018.12.002
    4 Spermatogonia B kif20a (kif20a) protein_coding marker DOI:10.1016/j.ejcb.2018.12.002
    5 Germline stem cells nanos3 (nanos3) protein_coding marker DOI:10.1016/j.cbpb.2019.06.002
    5 Germline stem cells dnd1 (dnd1) protein_coding marker DOI:10.1016/j.gene.2018.08.068
    6 Metaphase,anaphase primary spermatocytes mlh3 (mlh3) protein_coding marker DOI:10.1038/s41419-021-03676-x
    7 Premeiotic S phase cells dnmt1 (dnmt1) protein_coding marker DOI:10.1016/j.devcel.2010.09.010
    8 Leptotene primary spermatocytes nasp (nasp) protein_coding marker DOI:10.1038/s41419-021-03676-x
    9 Secondary spermatocytes racgap1 (racgap1) protein_coding marker DOI:10.1038/s41419-021-03676-x
    10 Late round spermatids LOC109972762 (LOC109972762) protein_coding marker DOI:10.1038/s41419-021-03676-x
    11 Sertoli cells LOC109969035 (LOC109969035) protein_coding marker DOI:10.1038/s41419-021-03676-x
    11 Sertoli cells amh (amh) protein_coding marker DOI:10.1038/s41419-021-03676-x
    12 Leydig cells star (star) protein_coding marker DOI:10.1038/s41419-021-03676-x
    12 Leydig cells LOC109973668 (LOC109973668) protein_coding marker DOI:10.1038/s41419-021-03676-x

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)