DATASET ID: GSE153961 (intersex)


Basic information


Tissue / Organ gonad
Experiment type baseline
Sample adult, untreatment
Source dataset ID GSM4661001
Project ID GSE153961
Species Monopterus albus

Clustering Result


Marker Relationship


Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
1 Early round spermatids spag6 (spag6) protein_coding marker DOI:10.1038/s41419-021-03676-x
2 Zygotene primary spermatocytes meiob (meiob) protein_coding marker DOI:10.1038/s41419-021-03676-x
3 Pachytene primary spermatocytes sycp2 (sycp2) protein_coding marker DOI:10.1038/s41419-021-03676-x
4 Spermatogonia B cdca3 (cdca3) protein_coding marker DOI:10.1038/s41419-021-03676-x
4 Spermatogonia B kmt5a (kmt5a) protein_coding marker DOI:10.1016/j.ejcb.2018.12.002
4 Spermatogonia B kif20a (kif20a) protein_coding marker DOI:10.1016/j.ejcb.2018.12.002
5 Germline stem cells nanos3 (nanos3) protein_coding marker DOI:10.1016/j.cbpb.2019.06.002
5 Germline stem cells dnd1 (dnd1) protein_coding marker DOI:10.1016/j.gene.2018.08.068
6 Metaphase,anaphase primary spermatocytes mlh3 (mlh3) protein_coding marker DOI:10.1038/s41419-021-03676-x
7 Premeiotic S phase cells dnmt1 (dnmt1) protein_coding marker DOI:10.1016/j.devcel.2010.09.010
8 Leptotene primary spermatocytes nasp (nasp) protein_coding marker DOI:10.1038/s41419-021-03676-x
9 Secondary spermatocytes racgap1 (racgap1) protein_coding marker DOI:10.1038/s41419-021-03676-x
10 Late round spermatids LOC109972762 (LOC109972762) protein_coding marker DOI:10.1038/s41419-021-03676-x
11 Sertoli cells LOC109969035 (LOC109969035) protein_coding marker DOI:10.1038/s41419-021-03676-x
11 Sertoli cells amh (amh) protein_coding marker DOI:10.1038/s41419-021-03676-x
12 Leydig cells star (star) protein_coding marker DOI:10.1038/s41419-021-03676-x
12 Leydig cells LOC109973668 (LOC109973668) protein_coding marker DOI:10.1038/s41419-021-03676-x

Expression



  • The expression of marker genes of each cluster is shown in the figure above.
  • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)