Fish Single-cell RNA Database

GENE ID: ENSDARG00000117452

Symbol	Location	Gene type	Genome version	Species
AL928714.1	10: 18798927 ~ 18802350 (+)	lincRNA	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment	Retinal progenitors (cluster: 2)	potential marker	NA
	GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
	GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
	GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
	GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
	GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
	GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
	GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
	GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
	GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment

After clicking the magnifying glass button, the clustering and expression information will be displayed below.