Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells |
Differentiated art.CMs (cluster: 2) |
potential marker |
NA |
|
GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells |
Differentiated art.ventricle (cluster: 4) |
potential marker |
NA |
|
GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment |
Horizontal cells (cluster: 4) |
potential marker |
NA |
|
GSE122680 (1.5dpf) | retina | baseline | 1.5dpf, WT, untreatment |
Horizontal cells (cluster: 9) |
potential marker |
NA |
|
GSE122680 (3dpf) | retina | baseline | 3dpf, WT, untreatment |
Retinal ganglion cells (cluster: 5) |
potential marker |
NA |
|
GSE151354 (wild type) | cartilage | baseline | 21dpf, wild type | ||||
GSE151354 (nkx3.2 mutant) | cartilage | growth | 21dpf, nkx3.2 mutant | ||||
GSE106587 (WT) | embryo | baseline | 12hpf, 6 somites, wild-type TLAB embryo | ||||
GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | ||||
GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | ||||
GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment | ||||
GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment | ||||
GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | ||||
GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |