XLOC_000001 (cep97)


Basic Information

Item Value
gene id XLOC_000001
gene name cep97
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 11822 ~ 16373 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000001
cgttaaagtaaaatatttttttgaagtaAACATATATTTGACATAGGAATGAACCCTACTATTCTgtaaaaatatccaaaaatataaatattttcagattAAATCATCCAATGAAATCTGCGCTCGGTTGCCTGGCGGTGACACAAGCGGGAAGTATGGCGGCGACCGGAGCGGGGATGGCGGATCCGGTGCTGCAGATGCCGAATCACAGAGGTCCGGGGGTTTTAGACCTGTCGGCTCGGGGTCTGCAGCGGCTGGAGCCTCAGCTGTTCCGCCcggattcacacacacacaccctgatcCTGGATCAGAACCAGCTGATGAAGCTGGAGCACCTGGAGCACAACCCCGACctgcagcagctgtcGGTGGCCTGTAACCGTCTGGTGCGCATGATGAACGTCTGCAGACTCACGCAGCTGCGGGTCCTGGACCTGCAGAATAACAGCATCGGCTGCATCGAGGGCCTGAAGGAGCTGCAGCAGCTGGAGCGCCTCAACCTGGCCGGGAACAACATCAAGGTGATGGAGCAGCTACACCACTGCGTCTCCCTGCAGCACCTCGACCTGTCTGATAATAATATCTCGCAGATCGGAGACGTGTCCAGGCTCTCGGCGCTGCAGacgcTGCTCCTGCACGGAAACATCATCACCACACTGCGCTCGGCTCCTGCTCACCTGCCGGCACACCTGAGAGTGCTGTCGCTGGCGGAGAACGAGATCCGGGACCTGActgaggtctgCTATCTGGCTCCGGTGCGGGGTCTGCAGCAGCTCTCCCTCCTCAGTAACCCGTGTGTGTCGTGTGTGTCCTCCGCTGTGTGTGATTATCGGCCATATGTGCTCAGCTGGTGCCTCGGCCTGGAGCTGCTAGATGGAGTCGCCGTCACACAGAAGGAAGGgctgaAGGCGGAGTGGCTGTACAGTCAGGGCAGAGGGCGAGTGTTTCGTCCGGGCGAGCACACTCAGCTGCTGCAGTATCTGTCCCGCACGTGTCCCGCCGCCGCCCGGCAGCCCCCAGCAGAGGACGCCAAACTGGAGAAGATCCTCAACAAACAACGgcatcATCAGAATCAGCTGCAGCATACACATCACCAGACTCCCTCTCGCCCCACACACCTGGACGTGCAGCAGCTCCACCAGAGCACACCTGATGAAGATGAGGAGGATGAAGatGTGGAGCCTGCAGTTCGGGTGAACGCGTGGATGGACTCTGTGTCTCCACCCTTGGCCGCTCCTCCCCCCTCCGCTCCTCCCCCCGCTGTGGCTGCAGACGGGCTGCTCCTGCAGGATCTGGAGGCCCCGGGGCCGCTGGCGTCTGAATCTGCCGCTCCTCCGGCTTCAGCTCCTGACAGCGGAGAGGAGGAGTTTGAGGACTCTCTGGCTCCTCCCACATCCACTCAGCACCGTGCCCCAGGGGAGGAGCCAGTGTGTGGGGGCGTGTCCTCAGAGCATCAGCAGTGTGAGCCGCAGGACGCCGCCGTGAGGATCCAGAGCTGGTGGAGGGGCCAGTGGACTCGCCAGCGCCACCCGCAGGCCAGAGCGGTGCGTGCAGAGATACGCATGCGGAGGATGCAGGACCACATCATACACCTGAGCACACAGCTGGACAGGGTCCGCCGGCAGCAAGAAGAAGAGCGACTGCAGAGACGTGTTCAAGAAGAAGCAGTGAAGGTTCTGTGGAAACAGCTGCAGGTGTTGTTGCAGTGGCAGGCGTCTGTGGACCAGCGGCttaacacaacacacactcctGCGCTCAACAAGACACACACTCCTGCCGACAGCGCAGCACACACTCCTGCAGACAGtagcactgacacacacacacacgctgatctCTCGGTGCCGGAGTGCGGTTCTCCGTGTGTGAACAGCAGCGCCGCCTCTGGAGACGCGCAGAACTGCAGTCTGCTGGAGCAGTACCTGAGCTCCGTCCAGCAGCAGGACGAGGAGGAGCGCGCCGCACAcgacctctgacctctgacctgacCGCACCgaggcattatgggatgttgaagGTCTCTGCCCTCGTCAGCAGTCGTGTATGATTAAACATCAGTTTTCTGCCAGTTCTCTTCAGTGCTGCTGACGGAGGCTCCCTAAGAAGTGCTGATGCTGTCTGAGTGCACTTACTGGTGCACATCTCTCCTTCACAGCCTGCAGCTGTAGATGAAGACGCCGCCGTGGAGTAATGTCAATGTGTTGgtcatctgctgcagttcaacccCGCAGAGAGTTTAGCaggcttcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagcgcgctCGGCATGTGCTGCAGCAGTCTTCAGTTGAGTGTTTTGTATGTCAGATGTTTTACAaatcatttttgtaaataaagttttaatttccttca
>TCONS_00000002
GCGGGGATGGCGGATCCGGTGCTGCAGATGCCGAATCACAGAGGTCCGGGGGTTTTAGACCTGTCGGCTCGGGGTCTGCAGCGGCTGGAGCCTCAGCTGTTCCGCCcggattcacacacacacaccctgatcCTGGATCAGAACCAGCTGATGAAGCTGGAGCACCTGGAGCACAACCCCGACctgcagcagctgtcGGTGGCCTGTAACCGTCTGGTGCGCATGATGAACGTCTGCAGACTCACGCAGCTGCGGGTCCTGGACCTGCAGAATAACAGCATCGGCTGCATCGAGGGCCTGAAGGAGCTGCAGCAGCTGGAGCGCCTCAACCTGGCCGGGAACAACATCAAGCACCTCGACCTGTCTGATAATAATATCTCGCAGATCGGAGACGTGTCCAGGCTCTCGGCGCTGCAGacgcTGCTCCTGCACGGAAACATCATCACCACACTGCGCTCGGCTCCTGCTCACCTGCCGGCACACCTGAGAGTGCTGTCGCTGGCGGAGAACGAGATCCGGGACCTGActgaggtctgCTATCTGGCTCCGGTGCGGGGTCTGCAGCAGCTCTCCCTCCTCAGTAACCCGTGTGTGTCGTGTGTGTCCTCCGCTGTGTGTGATTATCGGCCATATGTGCTCAGCTGGTGCCTCGGCCTGGAGCTGCTAGATGGAGTCGCCGTCACACAGAAGGAAGGgctgaAGGCGGAGTGGCTGTACAGTCA
>TCONS_00000003
GTGCGGATTACCGAGTTTAACGGGGCGTGTGGGGTTccgccgtgtgtgtgtgtttgtgtgtttgtgtgtgtaaactcCGTCATTCACTGATCACTGATCCGCTGCTCTCCACACACCTGCGGGAAAGCGTTTATTggcttgGTCCGGGGGTTTTAGACCTGTCGGCTCGGGGTCTGCAGCGGCTGGAGCCTCAGCTGTTCCGCCcggattcacacacacacaccctgatcCTGGATCAGAACCAGCTGATGAAGCTGGAGCACCTGGAGCACAACCCCGACctgcagcagctgtcGGTGGCCTGTAACCGTCTGGTGCGCATGATGAACGTCTGCAGACTCACGCAGCTGCGGGTCCTGGACCTGCAGAATAACAGCATCGGCTGCATCGAGGGCCTGAAGGAGCTGCAGCAGCTGGAGCGCCTCAACCTGGCCGGGAACAACATCAAGGTGATGGAGCAGCTACACCACTGCGTCTCCCTGCAGCACCTCGACCTGTCTGATAATAATATCTCGCAGATCGGAGACGTGTCCAGGCTCTCGGCGCTGCAGacgcTGCTCCTGCACGGAAACATCATCACCACACTGCGC
>TCONS_00000004
GGAGAAGATCCTCAACAAACAACGGTAGAGTCCAGACCAGCAGCACCGGCACCGCTCATAGCAGCACcgctcactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcaggcatcATCAGAATCAGCTGCAGCATACACATCACCAGACTCCCTCTCGCCCCACACACCTGGACGTGCAGCAGCTCCACCAGAGCACACCTGATGAAGATGAGGAGGATGAAGatGTGGAGCCTGCAGTTCGGGTGAACGCGTGGATGGACTCTGTGTCTCCACCCTTGGCCGCTCCTCCCCCCTCCGCTCCTCCCCCCGCTGTGGCTGCAGACGGGCTGCTCCTGCAGGATCTGGAGGCCCCGGGGCCGCTGGCGTCTGAATCTGCCGCTCCTCCGGCTTCAGCTCCTGACAGCGGAGAGGAGGAGTTTGAGGACTCTCTGGCTCCTCCCACATCCACTCAGCACCGTGCCCCAGGGGAGGAGCCAGTGTGTGGGGGCGTGTCCTCAGAGCATCAGCAGTGTGAGCCGCAGGACGCCGCCGTGAGGATCCAGAGCTGGTGGAGGGGCCAGTGGACTCGCCAGCGCCACCCGCAGGCC
>TCONS_00000005
CACACCTGGACGTGCAGCAGCTCCACCAGAGCACACCTGATGAAGATGAGGAGGATGAAGGTGATGATGTAATCGCTCAGGCTGCTGTGTatGTGGAGCCTGCAGTTCGGGTGAACGCGTGGATGGACTCTGTGTCTCCACCCTTGGCCGCTCCTCCCCCCTCCGCTCCTCCCCCCGCTGTGGCTGCAGACGGGCTGCTCCTGCAGGATCTGGAGGCCCCGGGGCCGCTGGCGTCTGAATCTGCCGCTCCTCCGGCTTCAGCTCCTGACAGCGGAGAGGAGGAGTTTGAGGACTCTCTGGCTCCTCCCACATCCACTCAGCACCGTGCCCCAGGGGAGGAGCCAGTGTGTGGGGGCGTGTCCTCAGAGCATCAGCAGTGTGAGCCGCAGGACGCCGCCGTGAGGATCCAGAGCTGGTGGAGGGGCCAGTGGACTCGCCAGCGCCACCCGCAGGCC
>TCONS_00000006
CCAGAGCGGTGCGTGCAGAGATACGCATGCGGAGGATGCAGGACCACATCATACACCTGAGCACACAGCTGGACAGCAAGAAGAAGAGCGACTGCAGAGACGTGTTCAAGAAGAAGCAGTGAAGGTTCTGTGGAAACAGCTGCAGGTGTTGTTGCAGTGGCAGGCGTCTGTGGACCAGCGGCttaacacaacacacactcctGCGCTCAACAAGACACACACTCCTGCCGACAGCGCAGCACACACTCCTGCAGACAGtagcactgacacacacacacacgctgatctCTCGGTGCCGGAGTGCGGTTCTCCGTGTGTGAACAGCAGCGCCGCCTCTGGAGACGCGCAGAACTGCAGTCTGCTGGAGCAGTACCTGAGCTCCGTCCAGCAGCAGGACGAGGAGGAGCGCGCCGCACAcgacctctgacctctgacctgacCGCACCgaggcattatgggatgttgaagGTCTCTGCCCTCGTCAGCAGTCGTGTATGATTAAACATCAGTTTTCTGCCAGTTCTCTTCAGTGCTGCTGACGGAGGCTCCCTAAGAAGTGCTGATGCTGTCTGAGTGCACTTACTGGTGCACATCTCTCCTTCACAGCCTGCAGCTGTAGATGAAGACGCCGCCGTGGAGTAATGTCAATGTGTTGgtcatctgctgcagttcaacccCGCAGAGAGTTTAGCaggcttcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

symbol description
cep97 Orthologous to human CEP97 (centrosomal protein 97).

GO:

id name namespace
GO:0008150 biological_process biological_process

KEGG:

id description
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-031030-11 Orthologous to human CEP97 (centrosomal protein 97).

Ensembl:

ensembl_id ENSDARG00000102407

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000001 False 2386 mRNA 0.58 11 11822 16373
TCONS_00000002 False 722 mRNA 0.61 7 11992 14058
TCONS_00000003 False 590 processed_transcript 0.59 5 12129 13257
TCONS_00000004 False 601 lncRNA 0.63 2 14167 15063
TCONS_00000005 False 455 lncRNA 0.65 2 14343 15063
TCONS_00000006 True 736 mRNA 0.56 3 15062 16272

Neighbor

gene id symbol gene type direction distance location
XLOC_000002 nfkbiz coding downstream 2343 18716 ~ 23389 (+)
XLOC_000003 CU651657.1 coding downstream 9212 25585 ~ 27255 (+)
XLOC_000004 eed coding downstream 11317 27690 ~ 34330 (+)
XLOC_000005 hikeshi coding downstream 20179 36552 ~ 39191 (+)
XLOC_000006 f7l coding downstream 93425 109798 ~ 119146 (+)
XLOC_000011 NA non-coding downstream 140419 156792 ~ 157282 (+)
XLOC_000018 NA non-coding downstream 339108 355481 ~ 358562 (+)
XLOC_000024 dre-mir-155 non-coding downstream 560071 576444 ~ 576521 (+)
XLOC_000026 NA non-coding downstream 778603 794976 ~ 911551 (+)
XLOC_000028 NA non-coding downstream 999439 1015812 ~ 1033638 (+)

Expression


Co-expression Network