G238021


Basic Information

Item Value
gene id G238021
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 978945 ~ 979179 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU270042
AAAGGAAAGAGGGAATGATTACCTAACATAGCAGCTAGTAATTTGGGACAGGCAGGAACCATTTAACACAAAAAGCGTGGTGTTTAATGAACAGTTTGCCTTCTGTGGGAGCGAATTAATCGCACTCTCTCCTTTTCCATCCATTTCACTTTCTGCCTCTCAGTGCATGTCCATTTTTTGTGCTATAAAAGAAACAGTGTTGAGCTAAAATGAAAATCCCTTCTTTATGCTTATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270042 True 235 lncRNA 0.39 1 978945 979179

Neighbor

gene id symbol gene type direction distance location
CI01000055_00965139_00966950 NA coding upstream 11065 965091 ~ 967880 (+)
CI01000055_00957662_00961485 NA coding upstream 16954 957493 ~ 961991 (+)
CI01000055_00946535_00947010 NA coding upstream 31905 946535 ~ 947040 (+)
CI01000055_00936846_00939813 NA coding upstream 38861 935952 ~ 940084 (+)
CI01000055_00907272_00908207 NA coding upstream 70603 907215 ~ 908342 (+)
CI01000055_01060543_01065327 GLTSCR1L coding downstream 81364 1060543 ~ 1065548 (+)
CI01000055_01073509_01078488 NA coding downstream 94261 1073440 ~ 1078859 (+)
CI01000055_01202631_01203404 NA coding downstream 222998 1202177 ~ 1203917 (+)
CI01000055_01218959_01265449 BAHCC1 coding downstream 237987 1217166 ~ 1266051 (+)
CI01000055_01317733_01319146 NA coding downstream 338554 1317733 ~ 1319162 (+)
G238020 NA non-coding upstream 1182 977516 ~ 977763 (+)
G238019 NA non-coding upstream 2556 975379 ~ 976389 (+)
G238018 NA non-coding upstream 4391 974309 ~ 974554 (+)
G238016 NA non-coding upstream 5440 973294 ~ 973505 (+)
G237984 NA non-coding upstream 7204 971276 ~ 971741 (+)
G237985 NA non-coding downstream 1630 980809 ~ 990495 (+)
G238037 NA non-coding downstream 44057 1023236 ~ 1023456 (+)
G238044 NA non-coding downstream 49925 1029104 ~ 1029325 (+)
G238046 NA non-coding downstream 52087 1031266 ~ 1031589 (+)
G238059 NA non-coding downstream 74509 1053688 ~ 1053972 (+)
G237840 NA other upstream 559013 418925 ~ 419932 (+)
G237680 NA other upstream 957783 20902 ~ 21162 (+)
G238534 NA other downstream 689231 1668410 ~ 1669244 (+)
CI01000055_02542526_02542861 NA other downstream 1561943 2542216 ~ 2544118 (+)
G239761 NA other downstream 3183071 4162250 ~ 4213402 (+)
G239755 NA other downstream 3275031 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 3284848 4265119 ~ 4273913 (+)

Expression


Co-expression Network