G238621


Basic Information

Item Value
gene id G238621
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000055
NCBI id null
chromosome length 6774723
location 1582400 ~ 1582632 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU270740
GTTTCTGTCCGAGAGATGTTTTGGAAAAAATATTAGACCATTCACAGAATTTGATAGCATTCATAAACGTTAGCCTGGTGTGTGTGGCTCTGTTTGGCAAACTGTTTGGGCGTCCATACGGGTTTTGCACAAAAGATTAACATGACAGCACATGCTAGTCGATAAGTCTACTCCACAGCAACTACATAAAACCGTTCAGAAACATCCAGTGTCATTCTAAAAGTTGTAACTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270740 True 233 lncRNA 0.40 1 1582400 1582632

Neighbor

gene id symbol gene type direction distance location
CI01000055_01572679_01573885 ARL3.1.S, ARL3, ARL3.1 coding upstream 8200 1572679 ~ 1574200 (+)
CI01000055_01534850_01561806 TIMP2, TIMP2A coding upstream 20054 1534552 ~ 1562346 (+)
CI01000055_01506298_01506585 NA coding upstream 75216 1505809 ~ 1507184 (+)
CI01000055_01494840_01495085 NA coding upstream 87007 1493953 ~ 1495393 (+)
CI01000055_01453127_01453420 NA coding upstream 128794 1452989 ~ 1453606 (+)
CI01000055_01640597_01654583 SEMA4GB, SEMA4G coding downstream 57965 1640597 ~ 1654811 (+)
CI01000055_01671436_01674983 C13H10ORF2, PEO1, C1H10ORF2, CUNH10ORF2, CLG8-24H10ORF2, CLG19H10ORF2, C19H10ORF2, CLG05H10ORF2, CLG5H10ORF2 coding downstream 88804 1671436 ~ 1675057 (+)
CI01000055_01676093_01680914 GALK1 coding downstream 93461 1676093 ~ 1681983 (+)
CI01000055_01694900_01711518 LLGL2 coding downstream 112268 1694900 ~ 1712042 (+)
CI01000055_01729194_01746887 NA coding downstream 146562 1729194 ~ 1747729 (+)
G238615 NA non-coding upstream 5818 1576341 ~ 1576582 (+)
G238614 NA non-coding upstream 49485 1532667 ~ 1532915 (+)
G238613 NA non-coding upstream 50062 1532111 ~ 1532338 (+)
G238611 NA non-coding upstream 52450 1529616 ~ 1529950 (+)
G238586 NA non-coding upstream 82126 1499292 ~ 1500274 (+)
G238625 NA non-coding downstream 7078 1589710 ~ 1590708 (+)
G238636 NA non-coding downstream 83312 1665944 ~ 1666239 (+)
G238644 NA non-coding downstream 142331 1724963 ~ 1725163 (+)
CI01000055_01796139_01801260 MBTD1, MBTD1.L non-coding downstream 217889 1796139 ~ 1803517 (+)
G238520 NA non-coding downstream 267417 1850049 ~ 1867893 (+)
G237840 NA other upstream 1162468 418925 ~ 419932 (+)
G237680 NA other upstream 1561238 20902 ~ 21162 (+)
G238534 NA other downstream 85778 1668410 ~ 1669244 (+)
CI01000055_02542526_02542861 NA other downstream 958490 2542216 ~ 2544118 (+)
G239761 NA other downstream 2579618 4162250 ~ 4213402 (+)
G239755 NA other downstream 2671578 4254210 ~ 4255092 (+)
CI01000055_04265119_04272728 NA other downstream 2681395 4265119 ~ 4273913 (+)

Expression


Co-expression Network